Vulcanisaeta distributa: Vdis_0625
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Entry
Vdis_0625 CDS
T01313
Name
(GenBank) tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
vdi
Vulcanisaeta distributa
Brite
KEGG Orthology (KO) [BR:
vdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vdi03016
]
Vdis_0625
Enzymes [BR:
vdi01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Vdis_0625
Transfer RNA biogenesis [BR:
vdi03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Vdis_0625
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
TSEN34_N
tRNA_int_end_N2
Motif
Other DBs
NCBI-ProteinID:
ADN50021
UniProt:
E1QV94
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All DBs
Position
complement(603564..604133)
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AA seq
189 aa
AA seq
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MHYSDVFRGYLIGGAVVVTDINEARKLYSMGFYGKFVNEDKVKLSEVNNVNSPLQLSIVE
ALYLVDKGLLEVFDGGGNRLTRDDLVRVGRSTVNNFDQVYTIYRELRDGGFVVKSGLKFG
SLFAVYERGPGIDHAPVLLHFIEPRRAVSALDITRAARLSHSVNKRFVLATQSEADGKMH
YIAFEWWRA
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgcactacagtgacgtgttcaggggttacctaattggcggtgctgtggttgttacggac
attaatgaggccaggaaactctactcaatggggttctacggtaagttcgttaatgaggat
aaggttaaactaagcgaggtcaacaacgtcaactcaccactgcagctttcgattgttgag
gctctttacctggtggataaggggttgctggaggtctttgatggcggcggtaataggtta
acgagggatgacctggttagggttgggcggagcaccgtgaataacttcgaccaggtgtat
acgatatatagggagttgagggatgggggcttcgtcgttaagagcgggcttaagttcggc
tcgttatttgcggtctacgagaggggacctgggattgaccacgcaccagtcctactacac
ttcattgagcccaggagggccgtgagtgcgcttgacataacgagggcagcaaggctcagt
cacagtgtgaataagaggtttgttctggcaacgcaaagtgaggctgatggtaagatgcac
tacatagcctttgagtggtggagggcgtag
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