Vulcanisaeta distributa: Vdis_1060
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Entry
Vdis_1060 CDS
T01313
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
vdi
Vulcanisaeta distributa
Brite
KEGG Orthology (KO) [BR:
vdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vdi03016
]
Vdis_1060
Enzymes [BR:
vdi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Vdis_1060
Transfer RNA biogenesis [BR:
vdi03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Vdis_1060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
CPDase
Motif
Other DBs
NCBI-ProteinID:
ADN50448
UniProt:
E1QQF3
LinkDB
All DBs
Position
1014165..1014707
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AA seq
180 aa
AA seq
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MGYFYGILIRELDITSLIKTLPVIPVERENLHMTIVYIGDQRPSQEIDDKIGISVGSIPC
FNVKLGQLILLPNALKPRVLAVEVIGNERLSRLRNTIMNILRDSSISINDKHSGEFKPHI
SIAYIKSKKLNPEDILETAREMGVEEELRDKSLLINSVSLILAKEDNYRELTRHELQCRF
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
gtgggctacttctacggcatcctaatcagggaattggacataacatcgttgattaagaca
ttacctgtaatacccgtggagagggagaacctacacatgaccattgtatacatcggtgac
caaaggccgagccaggaaatagacgataaaatcggaataagcgtaggctcaataccctgc
ttcaacgtcaagctcggacaattaatcctactgccaaatgccctgaagcccagggtgttg
gcagttgaggtcatcggcaatgagaggttgagtaggttgaggaatacgataatgaacata
ctaagggattcaagcatctcgattaacgacaagcactcaggcgagttcaagcctcacata
tcaatagcctacataaaatcaaagaagctaaacccagaggacatactcgagacagcccgt
gagatgggtgtcgaggaggagctacgggacaaatcactactaattaacagtgtctcctta
atactggcgaaggaggataactacagggagttaacaaggcatgaattgcaatgccgattt
taa
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