Vulcanisaeta distributa: Vdis_1417
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Entry
Vdis_1417 CDS
T01313
Name
(GenBank) tRNA intron endonuclease, catalytic domain protein
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
vdi
Vulcanisaeta distributa
Brite
KEGG Orthology (KO) [BR:
vdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vdi03016
]
Vdis_1417
Enzymes [BR:
vdi01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Vdis_1417
Transfer RNA biogenesis [BR:
vdi03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Vdis_1417
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-ProteinID:
ADN50803
UniProt:
E1QSL0
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All DBs
Position
1347246..1347788
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AA seq
180 aa
AA seq
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MRDSKNQEKTIVVRKTGTDEYSLVKISNGDVHEFEERGIGDVRDGTMVLRPIELVYLSII
GYRVLIDGNEVGVDELIKEVKSPHALTVYLDMRKRGYFIKPVINGPVDFLVWDKGKSPVN
SSPRYMIKIVTEGLGIQVMELLNVLKYSESMGTQLVLALVSSEGVITYYKAFTFRPVKGG
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgagggattcgaagaatcaggaaaaaaccatagtcgttaggaagactgggactgatgag
tatagtcttgttaagattagtaatggtgatgtccatgaattcgaggagaggggtattggc
gatgtgagggatggtaccatggtcctaaggcccatagagctcgtgtacttatccataatt
ggttacagggtgttgattgacggcaatgaggttggtgtggatgagttgataaaggaggtg
aagagtccgcacgccctaacggtttacctggacatgaggaagaggggttacttcataaag
cccgtgattaatggccccgtggacttcctggtgtgggataagggtaagagccccgtgaat
tcaagcccgaggtatatgataaagatagtcactgagggattgggtatacaggtaatggaa
ttactgaatgtgttgaagtacagtgagagcatgggcacacaattggtcctggctcttgtg
agctccgagggggttatcacttattataaggcatttacatttaggcctgttaagggtggt
tga
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