| Entry |
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| Name |
(GenBank) AAA family ATPase, CDC48 subfamily
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| KO |
| K13525 | transitional endoplasmic reticulum ATPase |
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| Organism |
vdi Vulcanisaeta distributa
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| Pathway |
| vdi04141 | Protein processing in endoplasmic reticulum |
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| Brite |
KEGG Orthology (KO) [BR:vdi00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Vdis_2007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:vdi03019]
Vdis_2007
03009 Ribosome biogenesis [BR:vdi03009]
Vdis_2007
04131 Membrane trafficking [BR:vdi04131]
Vdis_2007
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:vdi04147]
Vdis_2007
Messenger RNA biogenesis [BR:vdi03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Vdis_2007
Ribosome biogenesis [BR:vdi03009]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Vdis_2007
Membrane trafficking [BR:vdi04131]
SNARE
SNARE associated proteins
Others
Vdis_2007
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Vdis_2007
Exosome [BR:vdi04147]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Vdis_2007
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(1891010..1893256)
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| AA seq |
748 aa
MGSNNEVSLRVAEARTRDVGRLIVRIPQRYMRVLGIEPGEYVEIVGNKRSAYAQVWPAYT
DDEDKDYIRMDGVLRQNAGVSIGDVVKVRKANLRSAQRVTIAPVGEYIRVDPDYLKRAYL
LGKPVWKGSIIEIPYYTGSIRFMVTSVTPGPAAYVGIDTEVQVREEPVREMELTMPRVTW
EDIGDLEEAKRKIRELIELPLRHPEIFKHLGIEPPKGVLLIGPPGTGKTLLAKAVASEAN
AYFISINGPEIMSKYYGESEAKLREIFEEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKR
VVAQLLTLMDGLQERGQVIVIGATNRPEAVDPALRRPGRFDREIYISMPDKNARKEILQV
HTRNVPLCTEDDVKEKICDPSDVVNIDEIAEMTHGYTGADLAALVKEAAMIRLREAIDVT
KEIDLDQPQIPPEQLARIRIRMRDFLEAMKYIQPTVLREVIVEVPEVHWDDIGGYENVKQ
ELKEMVEWPLKYPRYFEELGVEPPKGILLFGPPGTGKTLLAKAVATESNANFIAVRGPEI
LSKWFGESERAIREIFKKARMAAPCVIFFDEIDAIAPARGLRVDSGATDRIVNQLLAEMD
GIAPLKNVVVIAATNRADIIDPALLRPGRFDRIVYVPPPDANARFEILKVHIRGLKLADD
VKDGNYKYLRDLARRTEGYTGADLAALVREAAMLALRETIRSNTNQVKPVGIEHFEEALK
VVPPSLSKQDIARFEEMARNLRRTLRGL |
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| NT seq |
2247 nt +upstreamnt +downstreamnt
atgggttctaataatgaggttagtcttagggttgcggaggctaggacgagggatgttggt
aggctcattgttaggattccccagcggtacatgagggtgcttggtattgagcctggggag
tatgttgagatagttggtaataagcgcagtgcctatgctcaggtatggcctgcctacact
gatgatgaggataaggactacataaggatggatggtgttttaaggcagaatgccggtgtt
agtattggtgatgttgttaaggttaggaaggctaacctaaggtctgcgcagagggtcacg
atagcgcctgttggtgagtacattagggttgaccctgattatctcaagagggcttacctg
cttggtaagcctgtttggaagggctcgatcatagagataccgtattacacgggctccatt
aggttcatggtaacgagcgtaacacctgggcctgctgcgtatgttggtattgataccgag
gttcaggttagggaggagcctgtcagggagatggagttaacaatgccgagggttacctgg
gaggacattggtgatctggaggaggcgaagaggaagattagagaattgatagagttaccg
ttgagacaccccgagatctttaaacaccttggtattgagcctcccaagggtgttctctta
attggcccgccgggcactggtaaaaccctcctggcaaaagccgtggcttcagaggccaat
gcctacttcatatcgattaacggccctgaaataatgagtaagtattatggtgagtctgag
gctaagttgagggagatttttgaggaggctaagaagaatgctcctgccattatctttatt
gatgagattgatgcaatagcaccaaagagggaagaagtaactggagaagttgagaagcgc
gttgttgcccagctactcacattaatggatggtttgcaggagaggggccaggtaatcgta
ataggagcaaccaacagaccagaagccgtagacccagcactaagaagaccaggaagattc
gacagagagatatacataagcatgcccgataagaatgcgagaaaggagatactccaggtg
cacacaaggaatgtgccgctgtgtactgaggatgatgttaaggagaagatatgcgatcca
agtgatgttgtgaatattgatgagattgcggagatgactcacggctatacgggggctgac
ctagcggcattagttaaggaggccgcgatgataaggcttagggaggctatagacgttact
aaggagattgatttggatcaaccacagataccgcctgagcagttggccaggattaggatt
aggatgagggacttcctagaggccatgaagtacatacaaccaacggtgcttagggaagtc
attgttgaggttcctgaggttcactgggatgatattggtggttacgagaacgtgaagcaa
gagcttaaggaaatggttgaatggccacttaagtacccaaggtactttgaggagctcggt
gttgagcctcctaagggtattttgttgtttggtcctcctggtactggtaagactcttttg
gctaaggctgtggctacggagagtaatgcgaattttattgctgttcgtggtcctgaaata
ctgagcaagtggttcggagaaagcgagagagcaatcagggaaatattcaaaaaagcaaga
atggcagcaccatgcgtaatattcttcgacgaaatagacgcaatagcaccagcaaggggc
ttgagggttgatagtggggccactgataggattgttaatcaattattagccgaaatggac
ggtatcgcaccattgaagaatgtcgtggttattgcggcgacgaatagagccgatataata
gacccagccttattaaggccaggtaggttcgataggattgtttacgtaccaccacccgat
gcgaatgccaggtttgagatacttaaggtccacattaggggcttaaagctcgctgatgat
gttaaggatggaaactataagtacctcagagacctggccagaaggaccgagggatacaca
ggggctgatttagcggcattggttagggaagccgcgatgctggctttgagagaaaccatt
aggagtaatactaaccaggttaagcctgtcggtattgagcattttgaagaggcccttaag
gtcgttccaccatcactgtctaagcaggatattgccagatttgaggagatggctagaaac
cttaggagaacgttaaggggcctctga |
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