Vulcanisaeta distributa: Vdis_2007
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Entry
Vdis_2007 CDS
T01313
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
vdi
Vulcanisaeta distributa
Pathway
vdi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Vdis_2007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vdi03019
]
Vdis_2007
03009 Ribosome biogenesis [BR:
vdi03009
]
Vdis_2007
04131 Membrane trafficking [BR:
vdi04131
]
Vdis_2007
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vdi04147
]
Vdis_2007
Messenger RNA biogenesis [BR:
vdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Vdis_2007
Ribosome biogenesis [BR:
vdi03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Vdis_2007
Membrane trafficking [BR:
vdi04131
]
SNARE
SNARE associated proteins
Others
Vdis_2007
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Vdis_2007
Exosome [BR:
vdi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Vdis_2007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_14
AAA_5
AAA_2
AAA_22
AAA_33
TIP49
CDC48_2
Vps4_C
AAA_28
IstB_IS21
nSTAND3
AAA_18
Mg_chelatase
AAA_7
RNA_helicase
DUF815
ABC_tran
Sigma54_activat
AAA_24
PhoH
NPHP3_N
Zeta_toxin
ATPase
Parvo_NS1
AAA_17
NACHT
AAA_19
ATP-synt_ab
SLFN-g3_helicase
MazE_antitoxin
Sigma54_activ_2
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
ADN51379
UniProt:
E1QP14
LinkDB
All DBs
Position
complement(1891010..1893256)
Genome browser
AA seq
748 aa
AA seq
DB search
MGSNNEVSLRVAEARTRDVGRLIVRIPQRYMRVLGIEPGEYVEIVGNKRSAYAQVWPAYT
DDEDKDYIRMDGVLRQNAGVSIGDVVKVRKANLRSAQRVTIAPVGEYIRVDPDYLKRAYL
LGKPVWKGSIIEIPYYTGSIRFMVTSVTPGPAAYVGIDTEVQVREEPVREMELTMPRVTW
EDIGDLEEAKRKIRELIELPLRHPEIFKHLGIEPPKGVLLIGPPGTGKTLLAKAVASEAN
AYFISINGPEIMSKYYGESEAKLREIFEEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKR
VVAQLLTLMDGLQERGQVIVIGATNRPEAVDPALRRPGRFDREIYISMPDKNARKEILQV
HTRNVPLCTEDDVKEKICDPSDVVNIDEIAEMTHGYTGADLAALVKEAAMIRLREAIDVT
KEIDLDQPQIPPEQLARIRIRMRDFLEAMKYIQPTVLREVIVEVPEVHWDDIGGYENVKQ
ELKEMVEWPLKYPRYFEELGVEPPKGILLFGPPGTGKTLLAKAVATESNANFIAVRGPEI
LSKWFGESERAIREIFKKARMAAPCVIFFDEIDAIAPARGLRVDSGATDRIVNQLLAEMD
GIAPLKNVVVIAATNRADIIDPALLRPGRFDRIVYVPPPDANARFEILKVHIRGLKLADD
VKDGNYKYLRDLARRTEGYTGADLAALVREAAMLALRETIRSNTNQVKPVGIEHFEEALK
VVPPSLSKQDIARFEEMARNLRRTLRGL
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgggttctaataatgaggttagtcttagggttgcggaggctaggacgagggatgttggt
aggctcattgttaggattccccagcggtacatgagggtgcttggtattgagcctggggag
tatgttgagatagttggtaataagcgcagtgcctatgctcaggtatggcctgcctacact
gatgatgaggataaggactacataaggatggatggtgttttaaggcagaatgccggtgtt
agtattggtgatgttgttaaggttaggaaggctaacctaaggtctgcgcagagggtcacg
atagcgcctgttggtgagtacattagggttgaccctgattatctcaagagggcttacctg
cttggtaagcctgtttggaagggctcgatcatagagataccgtattacacgggctccatt
aggttcatggtaacgagcgtaacacctgggcctgctgcgtatgttggtattgataccgag
gttcaggttagggaggagcctgtcagggagatggagttaacaatgccgagggttacctgg
gaggacattggtgatctggaggaggcgaagaggaagattagagaattgatagagttaccg
ttgagacaccccgagatctttaaacaccttggtattgagcctcccaagggtgttctctta
attggcccgccgggcactggtaaaaccctcctggcaaaagccgtggcttcagaggccaat
gcctacttcatatcgattaacggccctgaaataatgagtaagtattatggtgagtctgag
gctaagttgagggagatttttgaggaggctaagaagaatgctcctgccattatctttatt
gatgagattgatgcaatagcaccaaagagggaagaagtaactggagaagttgagaagcgc
gttgttgcccagctactcacattaatggatggtttgcaggagaggggccaggtaatcgta
ataggagcaaccaacagaccagaagccgtagacccagcactaagaagaccaggaagattc
gacagagagatatacataagcatgcccgataagaatgcgagaaaggagatactccaggtg
cacacaaggaatgtgccgctgtgtactgaggatgatgttaaggagaagatatgcgatcca
agtgatgttgtgaatattgatgagattgcggagatgactcacggctatacgggggctgac
ctagcggcattagttaaggaggccgcgatgataaggcttagggaggctatagacgttact
aaggagattgatttggatcaaccacagataccgcctgagcagttggccaggattaggatt
aggatgagggacttcctagaggccatgaagtacatacaaccaacggtgcttagggaagtc
attgttgaggttcctgaggttcactgggatgatattggtggttacgagaacgtgaagcaa
gagcttaaggaaatggttgaatggccacttaagtacccaaggtactttgaggagctcggt
gttgagcctcctaagggtattttgttgtttggtcctcctggtactggtaagactcttttg
gctaaggctgtggctacggagagtaatgcgaattttattgctgttcgtggtcctgaaata
ctgagcaagtggttcggagaaagcgagagagcaatcagggaaatattcaaaaaagcaaga
atggcagcaccatgcgtaatattcttcgacgaaatagacgcaatagcaccagcaaggggc
ttgagggttgatagtggggccactgataggattgttaatcaattattagccgaaatggac
ggtatcgcaccattgaagaatgtcgtggttattgcggcgacgaatagagccgatataata
gacccagccttattaaggccaggtaggttcgataggattgtttacgtaccaccacccgat
gcgaatgccaggtttgagatacttaaggtccacattaggggcttaaagctcgctgatgat
gttaaggatggaaactataagtacctcagagacctggccagaaggaccgagggatacaca
ggggctgatttagcggcattggttagggaagccgcgatgctggctttgagagaaaccatt
aggagtaatactaaccaggttaagcctgtcggtattgagcattttgaagaggcccttaag
gtcgttccaccatcactgtctaagcaggatattgccagatttgaggagatggctagaaac
cttaggagaacgttaaggggcctctga
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