Veillonella dispar: NCTC11831_00115
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Entry
NCTC11831_00115 CDS
T05848
Symbol
ykoD
Name
(GenBank) Putative HMP/thiamine import ATP-binding protein YkoD
KO
K16786
energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
Organism
vdn
Veillonella dispar
Pathway
vdn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vdn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NCTC11831_00115 (ykoD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vdn02000
]
NCTC11831_00115 (ykoD)
Transporters [BR:
vdn02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Energy-coupling factor transporter
NCTC11831_00115 (ykoD)
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Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
TrpP
AAA_21
SMC_N
AAA_16
AAA_22
AAA_25
NPHP3_N
AAA_29
ATPase_2
AAA_30
Rad17
NB-ARC
AAA_19
RNA_helicase
AAA_23
DUF494
nSTAND1
PhoH
RsgA_GTPase
nSTAND3
AAA_18
nSTAND6
Motif
Other DBs
NCBI-ProteinID:
VEG92716
LinkDB
All DBs
Position
1:141568..143193
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AA seq
541 aa
AA seq
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MERIQDLVYTHVQGGQFRWVTVSTLMLALGTILHLVSPSVAGVTPNWTIATYCVAILLTR
PSLSQTLGIGLVAALINVLTSKSAFPYGNLLSEPGGALTAALVTRAMLSVKFRKIGGFDL
TPILSGFLATVVSGGIFVTILWKVLGLPDNVYMYGMWPMVLIVGALNGAITPILYIPAQR
LFSKRGMLPSTDQLTSDHSHMTILPERQAKISIEHVNYYHPKATTPSLENINLDVHDGDF
LVVTGPAGCGKSTLCMAMVGAVPKFYGGRLEGMVFVDGKATTQMEIPELANHIGVVLADY
DTQLVTMTVREEVAFAMENRGYDRETIKARSEEVFAQVGLIGLEDRKITSLSGGQRQRLA
IASVLATNPTVLVLDEPTSSLDPDGTAELYRLVGDLNKKHGITVVVIDHDLHAVLPYANR
MALMVDGSIACDDDVPTTLRYMYEHNIHVDALPSVFTTYMELEQAGFHSDEPWLSIESAI
KGLHQIEMAHAIQTEVHGESNSRVNQSKTVENSTNQSNTVVNKQPIQRVDDVQGKDGGAH
A
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggaacggattcaagatcttgtgtacacgcatgtgcagggtggccagtttagatgggtt
actgtcagcacattgatgctcgcattgggcacgatattgcatttggtgagccctagtgtg
gctggggtaacgccgaactggacgattgctacgtactgcgtagctattttattgactcgc
cctagtttgagtcaaacattagggattggccttgtagcggccctcattaacgtattgacg
tctaagtcagcatttccttatggcaacttgttgtcagagccaggcggtgcgttgacggca
gctctcgtgacacgcgctatgttgtccgtgaagttccgtaaaatcggtggttttgattta
acgccaattctatctggctttttagcgactgttgtatctggtggtatcttcgttactatt
ttgtggaaagtattgggcttaccagacaatgtatatatgtatggtatgtggccgatggtt
cttatcgtaggcgctttgaatggtgccattacgccaatcttgtacattccggcgcaacgt
ctattctccaaacgcggtatgttgccaagtacagatcaattgacatctgaccatagtcac
atgacgattttgcctgagcgccaagctaagatttccattgaacacgtaaattactaccat
cctaaggcgacgacaccatctcttgaaaacatcaatctcgacgtacatgatggggacttc
ctcgttgtgactggtcctgctggttgtggtaaaagtactctttgcatggctatggtaggg
gctgtgcctaaattctacggcggtcgccttgaaggcatggtgttcgtagatggtaaagcg
actacgcaaatggaaattcctgaattggctaatcacatcggtgtagttcttgccgattac
gatacacaactcgtaacgatgactgttcgtgaagaagtggcctttgccatggaaaatcgc
ggttatgaccgtgaaaccatcaaagcacgttctgaagaggtgtttgcacaagttggtctt
atcggcttagaagatcgcaaaattactagtctatccggtggtcaacgccaacgtttggcg
attgcttccgtattggctacgaacccaactgttcttgttctcgatgaaccaacgagctcc
cttgacccagatgggactgccgaattatatcgcctcgtaggtgatttgaacaagaaacac
ggtattaccgttgtcgttatcgaccatgacttacacgctgtattgccgtatgcaaaccgc
atggctctcatggtggatggctctattgcatgtgacgacgatgtaccaactacgcttcgt
tacatgtacgaacacaatattcacgttgatgcgttgccatccgtgttcactacgtatatg
gaacttgaacaagcgggcttccacagcgatgagccttggcttagcatcgagtctgctatc
aagggcttgcaccaaattgaaatggctcacgccatccaaactgaggtgcatggtgaaagc
aactctagagtaaatcaatctaaaacagtagaaaattctactaatcaatccaatacagta
gtaaataaacaaccaattcaacgcgttgatgatgtacaaggaaaggacggtggcgctcat
gcttaa
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