Veillonella dispar: NCTC11831_00442
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Entry
NCTC11831_00442 CDS
T05848
Symbol
oprF
Name
(GenBank) Root adhesin
KO
K03286
OmpA-OmpF porin, OOP family
Organism
vdn
Veillonella dispar
Brite
KEGG Orthology (KO) [BR:
vdn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vdn02000
]
NCTC11831_00442 (oprF)
Transporters [BR:
vdn02000
]
Other transporters
Pores ion channels [TC:
1
]
NCTC11831_00442 (oprF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OMP_b-brl
OmpA
YfaZ
OmpA_membrane
Porin_4
DUF2490
Opacity
Motif
Other DBs
NCBI-ProteinID:
VEG93029
LinkDB
All DBs
Position
1:488899..489936
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AA seq
345 aa
AA seq
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MNKRLLALLAVAAVGVSVAGATPQTQFNKGEFQVDLGAAHSKAKTEHFNADAKWNFDGGL
TYALSDKTAIQYGYHGLNDKLGGIGYSDKMHEVNLVQSLNKNFAVYGGYAHISGDDFAKA
NNIAQAGVIGKANLGSKVEVYGKAGVGTKKTSTWEAGLGYKVNEDLDINAGYRYINTKHA
DKENISFQGPVVGLSYRFGGHKTVAPVATPAPAPVYTPAPAPVVEAPVYKTPKLDYYVQS
IYFDSDQDVARADQYPNLTAAVNAANQYSQDQIKLLGNADTDATPQYNVGLSERRVQYVA
QYLVNNGVSADRFIGIANGDTKPVATNSTAAGKAENRRVDVYIHR
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaagattattagctttattggcagttgctgctgtaggcgtatctgtagcaggt
gcaactccacaaactcaattcaacaaaggtgagttccaagttgatcttggtgcagctcat
tctaaagcaaaaactgaacacttcaatgctgatgcaaaatggaactttgatggtggtttg
acttatgctttgtctgataaaactgctattcaatatggttaccatggtttgaacgacaaa
ttgggcggcattggttatagcgacaaaatgcacgaagtaaacttggttcaatctttgaat
aaaaacttcgctgtatatggtggttatgctcacatctctggcgatgacttcgctaaagct
aacaacattgcacaagcaggtgtaattggtaaagctaaccttggctctaaagtagaagtg
tatggtaaagctggtgtaggtactaagaaaacttccacttgggaagctggtttaggttac
aaagtgaatgaagatttggatatcaacgctggttaccgttatatcaatacaaaacatgca
gataaggaaaatatctccttccaaggtcctgtagttggcttgtcctaccgctttggtggt
cacaaaacagtagctcctgtagcaactccagctccagctcctgtatacactccagctcca
gctcctgtagtagaagctcctgtatacaaaactcctaaattggattactatgtacaatcc
atctacttcgattccgaccaagatgtagctcgtgcagaccaatatccaaacttgacagct
gctgtaaacgctgctaaccaatactctcaagatcaaatcaaattgttgggtaatgctgat
actgacgcaactcctcaatacaatgttggcttgtccgaacgccgcgtacaatacgtagct
caatacttagtaaacaacggcgtatctgctgatcgtttcatcggtatcgctaatggcgac
actaaaccagtggcaactaactccactgcagctggtaaagctgaaaaccgtcgtgtagac
gtttacattcaccgctaa
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