Veillonella dispar: NCTC11831_00635
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Entry
NCTC11831_00635 CDS
T05848
Symbol
gcdB
Name
(GenBank) Glutaconyl-CoA decarboxylase subunit beta
KO
K20509
carboxybiotin decarboxylase [EC:
7.2.4.1
]
Organism
vdn
Veillonella dispar
Pathway
vdn00362
Benzoate degradation
vdn00620
Pyruvate metabolism
vdn00650
Butanoate metabolism
vdn01100
Metabolic pathways
vdn01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vdn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
NCTC11831_00635 (gcdB)
00650 Butanoate metabolism
NCTC11831_00635 (gcdB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
NCTC11831_00635 (gcdB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vdn02000
]
NCTC11831_00635 (gcdB)
Enzymes [BR:
vdn01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.1 carboxybiotin decarboxylase
NCTC11831_00635 (gcdB)
Transporters [BR:
vdn02000
]
Other transporters
Primary active transporters [TC:
3
]
NCTC11831_00635 (gcdB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OAD_beta
Motif
Other DBs
NCBI-ProteinID:
VEG93211
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All DBs
Position
1:682557..683678
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AA seq
373 aa
AA seq
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MEAFAVAIQSVITDSGFLAFTTGNAIMILVGLILLYLAFAKEFEPLLLGPIAFGCVLANI
PRNGFEEGVMALISAGISQEIFPPLIFLGVGAMTDFGPLIANPKTLLLGAAAQIGVFVAL
GGAMMLGFTAQEAAAIGIIGGADGPTSIYLATKLAPHLLGAIAVAAYSYMSLVPLIQPPV
MKLFTTQKEREIVMEQLREVTRFEKIVFPIISTIFISLLLPSITSLLGMLMLGNLFRESG
VTDRLSDTSQNALINTVTIFLATGTGLTMSAEHFLSVQTLLIICLGLVAFIGGTAGGVLF
GKLMSLVDGGKTNPLIGSAGVSAVPMAARVSQVVGAKANPANFLLMHAMGPNVAGVIGTA
VAAGTMLAMLSSH
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggaggcttttgctgttgcgattcaatccgttattacagatagcgggttcctcgcattt
acaacaggcaatgctattatgattcttgtaggtttgatcctattgtacttggcatttgct
aaagagtttgaacctttattgttgggtccgattgcgtttggttgtgtacttgctaatatt
cctcgtaatggtttcgaagaaggcgttatggcacttattagcgcaggtatctcccaagaa
atcttcccacctttaattttccttggtgtaggtgcaatgactgactttggtccactcatt
gctaatcctaaaacattgcttttaggtgctgctgctcaaatcggcgtattcgttgcttta
ggtggcgcaatgatgcttggcttcacagctcaagaagcagctgctatcggtatcatcggt
ggtgctgacggccctacatccatttacttagctactaagctagctcctcatttattaggt
gctatcgcggttgccgcatattcctatatgtccttggtaccgttgattcaaccacctgta
atgaaattatttactacgcaaaaagaacgcgaaattgttatggaacaattgcgtgaagtt
acacgttttgaaaaaatcgtattcccaattatttctacgatcttcatttccttattgctt
ccttccattacatcccttttaggtatgttgatgttaggtaacttgttccgtgaatctggc
gtaactgatcgtttgtccgatacatctcaaaatgctttgatcaatactgttactatcttc
ttagcaactggtactggtttaacaatgagtgcggaacacttcttaagcgtgcaaacactc
cttatcatttgcttaggtttggttgcattcatcggtggtactgctggtggcgtattattc
ggtaaattgatgagcttagtagatggtggtaaaacaaatccacttattggttctgctggt
gtatccgcggttccaatggcggctcgcgtatctcaagttgtaggtgcgaaagctaaccca
gctaacttcttgctcatgcatgctatgggtccaaacgtagctggcgttatcggtacagca
gtagcagcaggtacaatgcttgctatgttgtccagccactag
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