Veillonella dispar: NCTC11831_00725
Help
Entry
NCTC11831_00725 CDS
T05848
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vdn
Veillonella dispar
Pathway
vdn03420
Nucleotide excision repair
vdn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vdn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC11831_00725 (uvrD)
03430 Mismatch repair
NCTC11831_00725 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vdn03400
]
NCTC11831_00725 (uvrD)
Enzymes [BR:
vdn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC11831_00725 (uvrD)
DNA repair and recombination proteins [BR:
vdn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC11831_00725 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NCTC11831_00725 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
ResIII
DEAD
NPHP3_N
DUF7652
GLTP
Motif
Other DBs
NCBI-ProteinID:
VEG93295
LinkDB
All DBs
Position
1:775818..777575
Genome browser
AA seq
585 aa
AA seq
DB search
MTLEDRLKEFHSGDEEQLSFIFSDKPRLIVNAPAGCGKTTAMVSKIARELSLGNIESNKK
VLAMSFSVNASIRIKSDVKELLPSLVDNSKLLLKKLDIANYHNFAMRLLYKYGFLLNEEF
INLSEFRIISDSIVIKENLISSSDNYIIEELIKIVTSFDFSQIESVMDQYWETINNTLIN
KKIITYNGILIAAKKLLSNDNIKKFYTNYYSMIIIDEFQDTNILSYYFIKSLIDNNKVVF
LGDGIQRIYGFLGALDDVFQRVETDYSPQIISFKNNYRYNNTSIKELDHLIRAYVDQYID
PKLESSILIKKLQSDTEEVNFISEGIKNIIESNCNVAILLRAGWQGGIIAEKLKDESIHF
FNGLYSEDDCEFIDFYNVAIEEFYNNVSGNAVQSSLKKCLQAIKNREHEIYTNDQKKYIF
DSLYKLLEKLFEVSKNWEGTTKERYKNIEFSLNNNGLKHMIEYLDEKVVLTTIHSAKGLE
WDYVILPQMNKSVFPSWKHMCKKCHNLNSFKLDNDSCTSLLLPEMKTLFREELSVLYVAL
TRAKKNVFFTVNTGINTHGYPKKENCFINLPGINQLDFAWNDYVS
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgacattagaagatcgattaaaagaattccattctggtgatgaggaacagttaagtttt
attttctcggataaacctaggttgatagttaacgcaccagcgggttgtggtaaaacaaca
gctatggttagtaaaattgctagagagttaagtcttggtaatattgaaagtaataaaaaa
gtcttagcaatgtcatttagtgtaaatgcttcgattcgtataaagtcagatgtcaaagag
cttttgccttcattggtagataactcgaaattacttttaaagaagttagatatcgctaat
tatcataattttgcaatgagattactttataaatatggatttttattgaatgaggaattt
ataaatctttcagagtttagaatcattagtgatagtattgttataaaggaaaacttaatt
tcctcatccgataactatataatcgaagagttaataaaaatagttacgtcttttgatttt
tctcaaattgaatctgttatggatcaatattgggaaacaattaataatactcttattaat
aaaaaaataattacatataatggtattttaatagcggctaaaaaacttttatctaatgat
aatattaagaaattttatactaattattactcaatgattattatagatgaatttcaagat
actaatattcttagttactattttataaaatcattaattgataataataaagtagttttt
ctaggtgatggtattcaaagaatttatggttttttaggcgcattagatgatgtgtttcaa
cgtgtagaaactgactatagtccacagattatatcattcaagaataactatagatataat
aacacctctataaaagaactagatcatctaataagagcttatgtagatcaatatatagat
ccaaagttagagtcttctatattaataaaaaaactacaatcagatactgaagaggttaat
tttattagtgaaggaataaagaatataatagaaagtaattgtaatgttgctatactactt
cgagcaggatggcaaggtggcattatagctgaaaaattaaaagatgaatcaattcatttt
tttaatgggctttattcggaagatgattgtgaatttattgatttttataatgttgcaata
gaggagttttataataacgtttcaggtaatgcagttcaaagttcattaaaaaaatgcctg
caagctattaagaatcgtgaacatgaaatttatactaatgaccaaaaaaaatatatattt
gattcgttatataagttgttagaaaagttatttgaagtatctaaaaattgggagggtacc
acaaaagaaagatataaaaatattgagtttagtcttaataataatggcttaaaacatatg
atagaatatcttgatgaaaaagttgtattaactactattcactcagctaaaggattagaa
tgggactatgtaattttgccacaaatgaataaaagtgtttttccttcatggaaacatatg
tgtaagaagtgtcataatttaaatagttttaaattagataatgattcctgcacaagtttg
ttattaccagagatgaaaactttgtttagggaagagttaagtgtactctatgttgcttta
acacgtgcaaagaaaaatgttttttttactgttaatactggtataaatacacatgggtat
cctaagaaggaaaattgttttattaatttacctggtattaatcaattagattttgcgtgg
aatgattatgttagttag
DBGET
integrated database retrieval system
