Veillonella dispar: NCTC11831_01223
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Entry
NCTC11831_01223 CDS
T05848
Symbol
rlmCD
Name
(GenBank) 23S rRNA (uracil-C(5))-methyltransferase RlmCD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
vdn
Veillonella dispar
Brite
KEGG Orthology (KO) [BR:
vdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vdn03009
]
NCTC11831_01223 (rlmCD)
Enzymes [BR:
vdn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
NCTC11831_01223 (rlmCD)
Ribosome biogenesis [BR:
vdn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NCTC11831_01223 (rlmCD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
PrmA
MTS
Methyltransf_11
Cons_hypoth95
Methyltransf_15
Methyltransf_32
UPF0020
RrnaAD
Methyltransf_4
N6_N4_Mtase
Ubie_methyltran
PCMT
Methyltransf_12
TRM5-TYW2_MTfase
Methyltransf_23
TPMT
Motif
Other DBs
NCBI-ProteinID:
VEG93780
LinkDB
All DBs
Position
1:complement(1279097..1280584)
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AA seq
495 aa
AA seq
DB search
MNGTNRTSRKKQSKQHRRSNRSNSQQAINGQLSKKQQAILNAPVKFGDEVMVTIHGIGSS
GEGVGRVDDFTVFVPFALPGETVKVAIDMVKKTYATGRLLEIVTMASNRIDASCDLYGLC
GGCQLQHITYEGQLSLKTQKVKDVIERIGHQNPDLVKPTLGPKEPWAYRNKMQMPVGGTK
GDIQMGFYAMGSHDIVQGTNCPIQDEGNNIIAQACYQIAKAFDIEPYDEHTGKGVLRHII
GRIGQSGWMIILVTATEQLPHKEKWVEKLIERIPQVETIVHNVNGKRTNVILGPKNNILY
GDGTITDHIKDLRFTLSPHSFFQVNPEQTTVLYDQALAYADLKGDETVIDAYCGTGTISL
FLAHKAKHVIGIEIVEPAIINARENAQRNGYDNTEFIVADAAVEMPKLYKAGVRPDVIVF
DPIRAGCKEEVLTSAAGMEPKRIVYVSCNPATMARDIEILTHYGYELQEVQPVDMFPMTA
HVEAVALLTRNEVTQ
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtactaatcgtacatctcgtaaaaaacaatctaaacaacatagaaggagtaat
cgctctaattcacagcaagctataaacggccaattatctaaaaaacaacaggctatttta
aatgcgcctgttaagtttggtgatgaagtaatggtaacaattcatggcattggtagcagc
ggtgaaggggtaggtcgtgtagatgactttactgtctttgtgccttttgccttacctgga
gaaactgtgaaagtagctattgatatggttaaaaaaacctatgctacagggcgtctctta
gaaattgttacgatggcttccaatcgtatcgatgcaagttgtgatctttatggcttatgt
ggaggctgccaactgcaacacattacctatgaaggtcagctttcactaaaaacacaaaag
gtaaaggacgttatcgaacgtattggtcatcaaaatccagaccttgttaagcctacatta
ggacctaaagaaccttgggcatatcgcaataaaatgcaaatgcctgtaggcggtactaaa
ggcgatattcaaatgggattctatgcgatgggatctcacgatatcgtgcaaggcacaaac
tgtcctattcaagatgaagggaataatatcatcgctcaagcttgttaccaaatcgctaaa
gcgtttgatattgaaccgtatgatgaacatacaggaaagggtgtactgcgccatattatt
ggacgcattgggcaatctggatggatgattatacttgtaacggcaacagaacaattgccg
cataaagagaagtgggtagaaaaattaatagaacgaattcctcaagtagaaactattgtt
cataacgtaaatggtaagcgaactaatgttattttaggacctaaaaataatatcctctat
ggtgatgggacgattacagatcacattaaggatttaaggtttaccttatctccacattca
ttcttccaagtcaatccggaacaaactacagtactgtacgatcaagcattagcctatgca
gaccttaaaggggatgaaaccgttatcgatgcgtattgtggtacggggaccatttcacta
tttttagcacataaggcaaaacatgttatcggtattgaaatcgtagaaccagccattatt
aatgctcgtgaaaatgcccaacgcaatggctatgataatacagaattcatcgtcgctgat
gcggctgtagaaatgccaaaactttacaaggctggcgtacgaccagacgtaatcgtattc
gatccaattcgagcaggctgtaaagaagaagtactaacctctgcagctggcatggaacca
aaacgcattgtttacgtatcctgtaacccagccaccatggctcgagacattgaaatcctt
acacactacggctatgaactacaagaagtccaacctgtagacatgtttccaatgactgcg
catgtcgaagcggtggctttgcttactaggaacgaagtgacgcagtaa
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