KEGG   Veillonella dispar: NCTC11831_01228
Entry
NCTC11831_01228   CDS       T05848                                 
Symbol
uvrA
Name
(GenBank) Excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
vdn  Veillonella dispar
Pathway
vdn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vdn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    NCTC11831_01228 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vdn03400]
    NCTC11831_01228 (uvrA)
DNA repair and recombination proteins [BR:vdn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NCTC11831_01228 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      NCTC11831_01228 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_21 RsgA_GTPase AAA_29 AAA_16 nSTAND3 AAA_23 AAA_22 nSTAND1 Viral_helicase1 AAA_14 DnaJ_CXXCXGXG cobW AAA_25 NB-ARC T2SSE Zn_Tnp_IS91 NMDAR2_C
Other DBs
NCBI-ProteinID: VEG93785
LinkDB
Position
1:complement(1285700..1288552)
AA seq 950 aa
MKDQLIVKGARQHNLKNIDISLPRDQFIVLTGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARQFLGQMDKPDVDYIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARVGHAH
CPECGKPITQQTIQQMTDDVMSFPEGTKILVLAPMIQGKKGEHKSVFEQLRKEGFVRARV
DGVVRTLDEDIVLEKNKKHSIDIVVDRLVVKEGIESRLADSMETASKWAEGIVVIQEVDG
PEHMYSQHFACPDCHISLPKIEPRMFSFNSPFGACPACLGIGSTMEVDEERVIPDGSISF
ADGCVQALSSNPNAWFMRQVEGLLKANGYSLDSTYDELPKALQKKVMYGTTDKVAFTYEN
MRGEVKEFFTEYEGILPMVKRRHSEASTDSMREEFEKFMSIKPCTTCHGARLKPEVLAIT
VGDKNINEVTQLTIKEALDFFGNLQLTAREQVIGAQILKEINARLGFLNNVGLDYLTMNR
SAGTLSGGEAQRIRLATQIGSGLVGVLYILDEPSIGLHQRDNDRLIDTLKGLRDLGNTLL
VVEHDEDTMRAADYLVDIGPGAGEHGGQIIAAGTVDEVMKVENSITGQYLSGRKFIALPE
ERRKPGKNCIEIRGAKENNLQNVNIKFPIGLFNVVTGVSGSGKSTLINEILYKGLANQLY
RSFHKVGDHKEIRGLEHIDKIINIDQSPIGRTPRSNPATYTGVFDAIRELYSQTPEAKMR
GYKQGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEICKGARYNRETLEVKYKGKS
IADVLDMTVDDAVEFFSAIPKIHRKMITLQEVGLGYIRLGQAATTLSGGEAQRVKLATEL
ARRSTGKTLYILDEPTTGLHAEDIRKLLDVLQKLVDGGDTVVVIEHNLDVIKMADHIIDL
GPEGGNRGGTIVATGTPEQIAKVKESYTGKFLGPVLEQTKKFMKAAKNKN
NT seq 2853 nt   +upstreamnt  +downstreamnt
atgaaagatcaattgatagtaaaaggtgcgcgtcagcataaccttaaaaatatagatata
tccttaccacgggaccagtttattgtgttgacaggcctcagtggttctggcaaatcgtcc
ttggcatttgatacaatttacgcagaagggcaacgacgctatgtagagtctttatctgct
tatgcacgtcaattcttgggacaaatggataaacccgatgtagactatattgaaggttta
tctccagctatttctatcgaccaaaagaccacaagccgtaatcctcgttctacagttggt
actgtaacggagatttacgattacttgcgtctattatttgctcgcgtaggtcatgctcat
tgtcctgaatgtggtaagcctattacacagcaaacaatacaacaaatgacagatgacgta
atgagcttcccagaaggtactaagattttagtattagcccctatgattcaagggaaaaaa
ggggagcataaatctgtctttgaacaacttcgaaaagaaggctttgttcgtgcccgtgta
gatggtgttgtacgtacattagatgaagatattgtattagagaaaaataaaaaacattcc
atcgatatcgtagtagaccgtctcgttgtaaaagaaggtattgaatctcgcttagcagac
tctatggagaccgcatcaaaatgggcagaaggcattgtagttatccaagaggtagatgga
cctgaacacatgtatagccaacactttgcatgtccagattgtcatatttctttgccgaaa
attgaaccgcgtatgttctcctttaacagcccatttggtgcttgcccagcatgtttgggt
attggatccactatggaagtagacgaagagcgcgttattccggatggctctattagtttt
gccgatggttgtgtgcaagcattgagttctaatcctaatgcatggtttatgcgtcaagta
gaaggcctattaaaagctaatggatattctttagactctacctatgatgaattgccaaaa
gcattacagaagaaggttatgtatggcacgacggataaggtagctttcacctatgaaaat
atgagaggtgaagtaaaggaattctttacggagtacgaaggtattttgccgatggtaaaa
cgccgtcatagtgaagcatctaccgattccatgcgtgaagagtttgaaaaatttatgtcc
attaagccatgtactacttgtcatggtgctcgtcttaaacctgaagtattagccattacc
gtaggggataagaatatcaatgaagtgacccaattgaccattaaagaagcactggatttc
tttggtaatttacagttaactgcgcgggaacaagtgattggtgctcaaattttgaaggaa
atcaatgctcgtcttgggttcctcaacaatgtaggcctcgattaccttaccatgaaccgt
agtgcagggaccctttctggtggtgaagcacaacgtattcgcttggctacacaaattggc
tctggccttgttggtgtgttgtatattctagatgaaccatctatcggtttacaccaacga
gataatgatcgtcttatcgataccttgaaaggtttacgtgacttaggcaatacattgctc
gttgtagaacacgacgaagatacgatgcgtgctgcagactatctcgtagatatcggtcca
ggtgcaggtgagcatgggggtcaaattattgcagctggtactgtagacgaagtgatgaag
gtagaaaactccattactggtcagtacttgagtggacgtaagtttatagcgctccctgaa
gagcgacgtaagccaggtaagaattgcatcgaaattcgcggtgcgaaggaaaataattta
caaaatgtaaatataaaattccctatcggcctatttaatgtggttactggtgtcagtggt
tctggtaagtctaccttaatcaatgaaattctttataaaggtttagcgaatcagttgtac
cgttccttccataaggtaggggaccataaagaaatccgcggcttagaacatattgataaa
atcattaatattgaccaaagccctattggtcgtacacctcgctctaatccagctacctat
accggcgtatttgatgctatacgcgagctttatagccaaacaccagaggctaagatgcgc
ggctataaacaaggacgctttagctttaacgtaaaaggcggtcgctgtgaagcttgtcgt
ggagatggtattattaaaattgaaatgcacttcttgccagatgtatacgtaccttgcgaa
atatgtaaaggcgctcgttataatcgcgaaaccttagaggttaaatacaaaggcaaatcc
attgctgatgtattagatatgacggtagatgatgcagtagaattctttagtgctatccct
aaaattcatcgtaagatgattaccttacaagaggtaggtcttggctatatccgtttaggt
caagctgccacaacattatctggtggtgaggctcaacgcgttaaattagctactgaattg
gctcgtcgtagtacaggcaaaaccctttatatccttgatgaacctactacaggcttacat
gctgaagatattcgtaagctcttagatgtactacaaaaactcgttgatggtggagataca
gtggtcgttattgaacataacttagatgttattaagatggcggatcatattatcgattta
ggtccagaaggtggtaatcgcggtggtaccattgtagcaacaggtacgcctgagcaaatc
gccaaggtaaaagaaagctataccggtaaattcttaggccctgtattagaacagactaag
aaatttatgaaagcagctaaaaataagaactaa

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