Veillonella dispar: NCTC11831_01680
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Entry
NCTC11831_01680 CDS
T05848
Symbol
exoA
Name
(GenBank) Exodeoxyribonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
vdn
Veillonella dispar
Pathway
vdn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vdn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC11831_01680 (exoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vdn03400
]
NCTC11831_01680 (exoA)
Enzymes [BR:
vdn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NCTC11831_01680 (exoA)
DNA repair and recombination proteins [BR:
vdn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NCTC11831_01680 (exoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF3089
Motif
Other DBs
NCBI-ProteinID:
VEG94207
LinkDB
All DBs
Position
1:complement(1740423..1741178)
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AA seq
251 aa
AA seq
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MKLISWNVNGLRAAVTKGFMESFNELDADIFCLQETKLQPDQISLELPGYEQYWNSAVKK
GYSGTAVFTRIKPLSVTNGIGIEEHDQEGRVITAEYDNFYLVCCYTPNSQRELARLEYRM
AWEDAFRNYLLELDKKKPVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAKMTELLGA
GFTDTFRHLYPDAIEEYSWWSYMGKARERNTGWRIDYFITSKRLDDKIQEAKIHQQIFGS
DHCPVELDIDL
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
ttgaaattaatttcttggaatgtaaacggccttcgtgcggctgtaacaaaagggttcatg
gaatcctttaacgagttggatgcagatattttctgcttacaagaaactaaattacaacct
gaccaaatttctttggagttgccaggttatgagcaatattggaatagtgctgtgaaaaaa
ggctatagtggtacggctgtattcacgcgtattaaaccgttgtccgtaactaatggtatc
ggcattgaagaacacgatcaagagggccgtgttattactgctgaatatgacaatttctat
ttagtatgctgctatacgccaaatagccaacgtgaattggctcgtcttgagtaccgtatg
gcttgggaagacgcattccgcaactatttgcttgaattagataagaaaaaaccagtcatt
ctctgtggtgacctcaatgtagcacatcaagaaatcgaccttaaaaatcctaagacaaac
cgtaaaaatgcaggcttctctgatgaagagcgtgcaaaaatgaccgaactattaggtgct
ggttttacagacacattccgtcacctttatccagatgctattgaggaatatagctggtgg
tcttatatgggcaaggctcgtgaacgaaatacgggatggagaattgactattttatcacc
tctaaacgtcttgatgacaaaattcaagaagctaaaattcaccaacaaatctttggctct
gatcattgcccagtagaattagatatcgatttataa
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