Veillonella dispar: NCTC11831_01797
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Entry
NCTC11831_01797 CDS
T05848
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vdn
Veillonella dispar
Pathway
vdn03420
Nucleotide excision repair
vdn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vdn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC11831_01797 (pcrA_2)
03430 Mismatch repair
NCTC11831_01797 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vdn03400
]
NCTC11831_01797 (pcrA_2)
Enzymes [BR:
vdn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC11831_01797 (pcrA_2)
DNA repair and recombination proteins [BR:
vdn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC11831_01797 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
NCTC11831_01797 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
RNase_T
AAA_19
UvrD_C_2
DEDDh_C
AAA_30
RNase_H_2
ResIII
DEAD
Viral_helicase1
DNA_pol_A_exo1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
VEG94323
LinkDB
All DBs
Position
1:complement(1863464..1866052)
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AA seq
862 aa
AA seq
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MLINREQQRVIDEVEQNILLLASAGTGKTNTLAYRVAHLIEGGYAKAENILCMTFTNKAA
NEMKDRIQSLVGSPAKAVEISTFHSFCFFVLQQEGKRNETLYTDVTIFDEEDCKELSEPY
RPGKLREMSFANIIGMVKEYRSLYGFYSDDLVGDYKRTIDRLQKEQRPAIEQQFSSFGNV
LYSELHDFLNHGHEWIAAYDENLASVHGLDFTDLICGVHRLFQDPVVRERWSSRYSYISV
DEMQDTGVLEYKVLEMLWEGNHVLLCGDYFQTIYEWRGSDPFRLLKQFDADFKPLKIIFY
ENYRSNWTLFTMAFKTLQNMFPDLVGSIYTELPRANSERKGKPVLIKGCKNSYLEGRYIY
EAICALPKDANIGVLVRDNKKAQRLSDSFERLNNEKAEDERRHFMIIDEFKFFRRQEIKD
VMAYFKLLMNPNDSVSAKRIIKRYVAGIGDARIAAIESPETRQVGLKLTDFMDMPIFEAE
PYAKLVSGLENHEVVVYDVESTGTDTSQDRIIQIAAIRIDENGQVLETFERFINPGVPVG
QSEEVHGFSDAYLKEHGEEPAIVLQAFKEFSKNAIIVGHNVNYDVTIFTNELARHNLGNP
EFKAIYDTLDIYRRFYPNLPNHKLGFLASEFPINHEPTHNAMDDILATSQLLIYAVKENI
VPTTTGRMVAINKYKAAFTNIASQMATLRRKAYTELPTQLLAYIMNQMGVLEYYKSHGEV
AKVEHIRDLYRIMEKLDAAYEGPAGLARLNQILQMAALTAGEPAQQVRNEDRIPIITIHQ
AKGSEFDHVFLAGLNEGTFPSPFAIAEGREDEEKRLFYVAITRPKQELTITFEQTNIRGR
AVQPSSLLNYMPRDPELVERRY
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcaatcgtgaacaacaacgcgttattgatgaagttgaacagaatatcctcttg
ttagcgtccgctgggacgggaaaaacgaatacacttgcttatcgagtggctcacctcatc
gagggcggctatgcgaaggcggagaatatcttgtgcatgacctttacgaacaaggcagca
aacgagatgaaagaccgcattcaatcgctcgtaggcagtcctgcaaaggctgtggagatt
agtacattccacagcttttgctttttcgtactccaacaagaggggaagcgcaatgaaacc
ttgtatacggatgtaacgatctttgatgaagaggattgcaaggaattgtctgaaccgtat
cgtccaggtaagttgcgagaaatgtcctttgccaacatcatcggtatggtaaaagaatat
cgttccttatatggcttttattctgatgatctcgtaggcgattataaacgaacgattgat
cgtttgcaaaaggaacagcgtcctgctattgagcaacagttctctagctttgggaatgtt
ctttatagtgaactccatgacttcttgaaccatggtcacgaatggattgctgcctatgat
gaaaacttagcctccgtacatggtctagatttcacagatctcatttgcggtgttcatcgt
ctattccaagatcctgtagttcgagaacgttggagcagtcgttatagttatatctctgtt
gatgaaatgcaagataccggtgtactagagtacaaggtacttgaaatgctttgggaaggt
aatcacgtcctattatgtggggactatttccaaaccatatacgagtggcgtgggtctgat
ccattccgtttactcaagcaatttgatgcggactttaagcctttaaaaatcattttctac
gaaaactaccgctctaactggacgctttttacgatggccttcaaaacattgcagaatatg
ttccctgatctggtaggttctatctatactgaattgcctcgcgccaatagtgaaagaaag
ggcaagcctgttctcataaaaggctgtaaaaacagctatcttgagggacgatatatctat
gaagctatctgcgccttgccaaaggatgccaatattggcgttttagtgcgggataataaa
aaggcgcaacggctgagcgactcctttgaacgcctgaacaacgaaaaggctgaagatgaa
cgccgtcactttatgatcattgacgagtttaaattctttagacgtcaagaaattaaagac
gttatggcttactttaaactgcttatgaacccgaatgactcggtcagcgctaagcgcatt
attaaacgctatgttgccggcatcggtgacgctcgtattgcagctattgaaagtcctgag
acgcgtcaagtgggcttaaaattgacggactttatggatatgcctatctttgaagcagag
ccttatgcgaagctcgtcagtggcttagaaaatcatgaggtcgtggtgtatgacgtagaa
agtactggtaccgatacgtcccaggatcgcatcattcaaattgcagccatccgcatcgat
gaaaatgggcaggtcctagaaacctttgaacgctttatcaaccccggcgtacctgtggga
caatccgaagaggtacacggcttttcggatgcgtatttaaaagaacacggcgaagagcca
gctatagtgctacaagcctttaaggaattctccaagaatgctattatcgtaggccacaat
gtaaattatgacgtgaccatctttactaatgaattggcacgccataatttaggtaatcca
gaatttaaggctatctacgatacactcgatatttaccgtcgtttctatcctaatttgcca
aatcataaactgggcttcctagcatcagagtttcctatcaatcatgagcctacgcacaat
gcgatggacgatatcttggccacttcacagcttttaatctatgcagtaaaagaaaatatc
gtgcccactacaacaggtcgtatggtggcgattaataagtataaagcggctttcaccaat
attgcgtcccaaatggcgacattgcgtagaaaggcctatacagagctacctacacagtta
ttagcgtacattatgaaccaaatgggggttctagagtactataaatctcatggggaagta
gcgaaggtagagcatatacgggatctatatcgcatcatggaaaaacttgatgctgcctat
gaaggtccagcaggtttggctcgattaaatcaaattttgcagatggcagcccttacagca
ggtgagcctgcccaacaggtacgcaatgaagatcgcattccaatcattaccattcaccaa
gcgaaggggagcgagtttgaccacgtgttcttggccggcctcaatgaaggaaccttccca
agtccttttgctattgcagaaggtcgtgaagacgaagaaaagcgcttgttctatgtggct
attacacgacctaaacaagagctgactattacctttgaacaaacgaatatacgtggccga
gctgttcaaccaagctcgctactgaactacatgccacgagaccctgagctcgtagaaagg
agatactaa
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