Verrucomicrobium sp. GAS474: SAMN05444156_0676
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Entry
SAMN05444156_0676 CDS
T09813
Name
(GenBank) two-component system, NtrC family, response regulator PilR/two-component system, NtrC family, response regulator HydG/two-component system, NtrC family, response regulator AtoC
Organism
veg
Verrucomicrobium sp. GAS474
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
HTH_50
AAA_2
HTH_28
AAA_16
AAA_3
HTH_30
Phage_CP76
AAA_7
Mg_chelatase
AAA_19
Xre-like-HTH
AAA_22
MerR
Motif
Other DBs
NCBI-ProteinID:
SDT91248
UniProt:
A0A1H2E989
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Position
I:complement(778275..779747)
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AA seq
490 aa
AA seq
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MQFERVIVVDDDPLIRRLIVGHLQKQNLPVLGVVNCQQAIEAQQKEPADLMIIDLLLPDG
NGLEVMQAVKKLGPVECIIVTSFGSIESAVDAMKMGAANYLLKPFTLAQFDMALSQLLEQ
RKLREENDYLKEQLAAETSTGELLYTSTEMAEVEKLIKRVGPTNATVLIEGESGTGKELV
ARAIHQHSQRANAPYIKVNCAAVPENLLESEFFGHEKGSFTGASSRREGRFELANGGTLL
LDEVTEISLGLQAKLLRVLQEKEFERVGGNRTIRVDVRILATTNRDIERSIAAGDFRQDL
YFRLNVVPVKLPALRERAGEVEYLLKSFLDRLAKKYNKPTPIVSEEALRQLSEYHWPGNV
RELQNYAERAVILAEENRALEFHDFISSRPGGGAGIGAKAGAGAGGAVVGSVGAGVPAPN
AVAPVMAEGEVLTVEEMEKRLIGNALKKTKGNRNEAARLLGINVRTLRNKLNQYQQELGL
GAELTGEDAE
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcgaacgcgtcatcgttgtcgacgacgatcccctgatccggcggctcatcgtc
ggccatctgcagaaacagaatctccccgtcctcggcgtcgtcaactgccagcaggccatc
gaggcccagcagaaggaaccggccgacctgatgatcatcgacctcctccttcccgacggg
aacgggctggaggtgatgcaggcggtgaagaaactcggccccgtcgagtgcatcatcgtc
accagcttcggcagcatcgagtcggccgtcgacgcgatgaagatgggagcggccaactac
ctcctgaagcccttcaccttggcccagttcgacatggcgctctcccagctcctcgagcag
cggaagctccgggaagagaacgactatctcaaggagcagctcgccgccgagacctcgacc
ggggaactcctctacaccagcaccgagatggccgaggtcgagaagctgatcaagcgcgtc
ggcccgaccaacgccaccgtcctcatcgagggcgagagcgggacggggaaggaacttgtc
gcccgcgccatccaccagcacagccagcgggccaacgccccctacatcaaggtgaactgc
gccgccgtcccggagaacctcctggagagcgagttcttcggccacgagaagggctccttc
accggggccagcagccgccgcgagggccgcttcgagctcgccaacggcgggaccctcctc
ctcgacgaggtcaccgagatctccctcggcctccaggcgaagctcctccgcgtgctgcag
gaaaaggaattcgagcgcgtcggcgggaaccggacgatccgcgtcgacgtccgcatcctc
gccacgacgaaccgcgacatcgagcggagcatcgccgcgggcgacttccgccaggatctc
tacttccgcctcaacgtcgtccccgtgaagctccccgccctccgcgagcgggcgggcgag
gtcgagtacctgctgaagagcttcctcgaccgcctcgccaagaaatacaacaagccgacg
ccgatcgtcagcgaggaggccctccgccagctttccgaataccactggccgggcaacgtc
cgcgagctgcagaactacgccgagcgcgccgtcatcctcgccgaggaaaatcgcgccctc
gaattccacgacttcatctcctcccgccccggcggcggcgccgggatcggggcgaaggcg
ggagccggcgcgggcggtgccgtcgtcggctcggtcggggcgggcgtccccgcgccgaac
gccgtcgcccccgtcatggccgagggcgaagtcctgaccgtcgaggaaatggaaaagcgg
ctcatcggcaacgccctgaagaagaccaagggcaaccggaacgaggcggcccgcctcctc
ggcatcaatgtccgcaccctccggaacaagctgaaccaataccagcaggaactcggcctc
ggcgcggaactgaccggcgaggacgcggagtaa
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