Verrucomicrobium sp. GAS474: SAMN05444156_0734
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Entry
SAMN05444156_0734 CDS
T09813
Name
(GenBank) replication restart DNA helicase PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
veg
Verrucomicrobium sp. GAS474
Pathway
veg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
veg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SAMN05444156_0734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
veg03400
]
SAMN05444156_0734
Enzymes [BR:
veg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMN05444156_0734
DNA repair and recombination proteins [BR:
veg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SAMN05444156_0734
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
PriA_C
AAA_19
nSTAND_NTPase5
Cas12f1-like_TNB
Zeta_toxin
RecA_N
AAA_16
Motif
Other DBs
NCBI-ProteinID:
SDT91860
LinkDB
All DBs
Position
I:851862..854153
Genome browser
AA seq
763 aa
AA seq
DB search
MEPGLFSDDCAYVRVVPENSRDRAYDYAVPDALRGRVGVGMRVRMPLRNAETSGIVIETL
ARTGYAKIRAITGLVGETPVVPPSLFALARWMADYYCAPLALALRCILPEPVRAEAGALV
RLWVAVRPDVGDETVELALGKAKKQLEAWRWLREKGPGWLGDLCGESGIGRAVWQGLRDR
GFVSIENAERERDPFLRLPDPVGAEHEPNAAQAAALAMIAEEGAKHGTAEKPRPILLHGV
TGSGKTEVYLRAIAAVLDAGKSALMIVPEIALTPQAVERFRARFLGKKVRVAVLHSGLSR
GERYDQWRQIREGRARIVIGARSAIFAPAEDLGLIVVDEEHEGSYKQEEAPYYHGRDLAV
MRAHLEGIPIVLGSATPSLETFHNAGAEQGKYRMVRLPARVAERPMPLVHVIDLRQKGKP
KDGEPPPSAAITPRLREAVEKRLERHEQTLLYLNRRGHSTTLQCPECGHVEMCPHCSLSL
TFHRSDARLRCHLCDHVAAVPSRCPACAAPGYRYGGQGTQKIEEAVEQAFPKARILRMDS
DSMRGKDVHHQALAAFAAGEVDILVGTQMIAKGLDFPKVTCVGVINVDGALQIPDFRAGE
RVFQQLMQVAGRAGRAETKGEVFIQTRTPFHPAIQYARHHDYDGFAEQELEFRKALGYPP
YRRAILVRWKGKSEEKTRFVAEQIGRKIAEGFQAVGANGAKLGEAQEVAPASIVRIDGLF
RFNQLLLTTRVPEAARFLTALLADPAWEEEVKTSVDVDPLMVG
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggaacccggcctcttctccgacgactgcgcctacgtccgcgtcgtcccggagaattcc
cgcgaccgggcctacgactacgccgtccccgacgcgctgcgcgggcgggtcggcgtgggg
atgcgggtccgcatgcccctccgcaacgcggagacctcgggcatcgtcatcgagacgctc
gcccggaccggctacgcgaagatccgcgcgatcaccggcctcgtcggggagacccccgtc
gtcccgccctcgctcttcgctctcgcgcggtggatggccgactattactgcgcccccctc
gccctcgccctccgctgcatcctcccggagccggtccgggccgaggccggggcgctggtc
cgcctctgggtcgcggtccggcccgacgtcggcgacgagacggtcgagctcgccctcggc
aaggcgaagaagcagctcgaggcgtggcgctggctccgggaaaaaggccccggctggctc
ggcgacctctgcggcgagagcggcatcgggcgggccgtctggcagggcctccgcgaccgg
ggcttcgtctcgatcgagaacgccgagagggaacgcgatcccttcctccgcctccccgat
cccgtcggcgccgagcacgagccgaacgcggcgcaggccgccgccctggcgatgatcgcc
gaggagggggcgaagcacgggacggccgaaaaaccccgcccgatcctcctccacggcgtc
accgggagcggcaagaccgaggtctacctccgcgccatcgccgccgtcctcgacgccggg
aagagcgccctcatgatcgtccccgagatcgcgctgaccccgcaggccgtcgagcggttc
cgcgcccgcttcctcgggaagaaagtccgcgtcgccgtcctccacagcggcttgtcacga
ggcgaacggtacgaccagtggcggcagatccgggagggccgcgcccggatcgtcatcggg
gcccgctcggcgatcttcgccccggcggaagacctcggcctcatcgtcgtcgacgaggag
cacgaaggttcctacaagcaggaggaggccccctactaccacgggcgcgacctcgccgtg
atgcgggcccacctcgaggggatccccatcgtcctcggctcggcgacgccctcgctcgag
accttccacaacgccggcgcggagcaggggaaataccggatggtccgcctccccgcccgc
gtcgccgagcgccccatgcccctcgtccacgtcatcgacctccggcagaagggcaagccg
aaggacggggaacccccgccctccgccgccatcacgccccgcctccgcgaggccgtcgag
aagcggctcgaacggcacgagcagaccctcctctacctcaaccgccgcggccattcgacg
accctccagtgccccgaatgcggccacgtcgagatgtgcccccactgcagcctctccctc
accttccaccgctccgacgcgcggctccgctgccacctctgcgaccacgtcgcggcggtc
ccctcccgctgccccgcctgcgccgcccccggctaccgctacggcgggcagggaacccag
aagatcgaggaagccgtcgagcaggccttcccgaaggcccgcatcctccggatggactcc
gactcgatgcgcgggaaggacgtccaccaccaggccctcgccgcgttcgccgccggggag
gtcgacatcctcgtggggacccagatgatcgccaagggcctcgacttcccgaaggtcacc
tgcgtcggcgtcatcaacgtcgacggggcgctccagatccccgacttccgcgccggggag
cgggtcttccagcagctcatgcaggtggcgggccgcgcgggccgcgccgagacgaagggc
gaggtcttcatccagacccggaccccgttccaccccgcgatccagtacgcgcggcaccac
gattacgacggcttcgccgagcaggagctcgagttccgcaaggccctcggctaccccccc
taccgccgcgccatcctcgtccggtggaaagggaagagcgaggagaagacccgcttcgtc
gccgagcagatcggcaggaaaatcgccgaaggcttccaggccgtcggggccaacggcgcg
aagctcggcgaagcccaggaagtcgcccccgcctcgatcgtccggatcgacgggttgttc
cgcttcaaccagttgttgctgaccacccgcgtccccgaagccgcccgcttcctcaccgcc
ctcctcgccgacccggcctgggaagaggaggtgaagacctccgtcgacgtcgatccgttg
atggtcgggtag
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