Verrucomicrobium sp. GAS474: SAMN05444156_0901
Help
Entry
SAMN05444156_0901 CDS
T09813
Name
(GenBank) vitamin B12 transporter
KO
K16092
vitamin B12 transporter
Organism
veg
Verrucomicrobium sp. GAS474
Brite
KEGG Orthology (KO) [BR:
veg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
veg02000
]
SAMN05444156_0901
Transporters [BR:
veg02000
]
Other transporters
Pores ion channels [TC:
1
]
SAMN05444156_0901
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
SDT93792
LinkDB
All DBs
Position
I:1075535..1077733
Genome browser
AA seq
732 aa
AA seq
DB search
MGRKSALRLLPLSLLGWGLGLGALSSREARGEEAAAVPLPVVTVTGAAPGGSAGTGTAAV
YDQAAIETIRPFNLTDLLSQNSFGFSVNYSPGHTLFNIRGALTAAQGWDDVSQIPVLVNG
RRAGTANIGKLSTEDAARVEVSRGPASVAYDSTASMGGVVNLVTKDGTTAPGNRVTGTFG
SFDRYTGQIESGGKEKAFDWYVSATGSTSGNYTSGSGSAGTMPNTAYDRGNLNLTLGYDL
DATGANRIEVIVRHDGVYDAGHPGLTYSLTDTDTRMNTSVDAIYTGAATGGGLRWSDHFY
YVQDVDIFDWPQNPFIGLAASGAGYYGTPGVLRDRDARTQNLAGDKIAFTVEPTESNTLL
AGVDLEHGWLENTRSRVAAPGYPAANPFAPAVNLPPTEYNNESYMAAVYAEDAQRFLDDR
LVLQAGGRFQFTNAKLLGTEYQTASFDSAARNAGSGTYRVASAYEVRKGWKLRASVGTGF
RAVTPGELHSATQQGNGFTVSGNPNLKDEYSLTSEYGVHGEEGPLSADLAYFRNTIHNSV
VSLPTATPLVYTWRNIDREKISGLEAAFSYDLARLGKWAGYRLEPYATGSKLFQFDGEGV
PYALSDSHMLKIDDYQATLGLRGGKIGKWSSDWYAVWSGPSYESAASEGYTADSHLISQV
PSWWVLNMRQSYEVTASLSLFFGINNLLDRDYDPASLGLNRANSGILPKATAGGLGSSAP
GREFLGGFVVSF
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgaaaatccgctctccgactgctgccgctctccctcctggggtgggggctcggt
ctcggcgcgctttcgtcccgggaggcgcggggggaagaggccgccgccgttccccttccc
gtcgtcacggtgaccggcgccgccccgggcgggagcgcggggaccggtaccgccgcggtc
tacgaccaggccgccatcgagacgatccgccccttcaacctcaccgacctgctgagccag
aattctttcggcttctcggtcaattactcgccgggccataccctcttcaacatccggggg
gcgctgaccgccgcgcagggctgggacgacgtcagccagatcccggtcctcgtcaacggg
cggcgcgcggggacggcgaacatcgggaagctctccaccgaggacgcggcgcgggtcgag
gtctcgcgcgggcccgcctcggtcgcctacgacagcacggcctcgatggggggcgtcgtc
aacctcgtcacgaaggacgggacgacggccccgggcaaccgggtgacgggaaccttcggc
tccttcgaccgctacaccggccagatcgagagcggcgggaaggagaaagccttcgactgg
tacgtctcggcaaccggctcgacgagcgggaactacacctcgggttccgggagcgccggg
acgatgccgaacaccgcctacgaccgggggaacctgaacctcaccctcggctacgacctc
gacgcgaccggcgcgaaccggatcgaggtgatcgtccgccacgacggcgtctacgacgcg
ggccaccccggcctcacctacagcctcaccgacaccgacacgcggatgaacacctcggtc
gacgcgatctacaccggggcggcgacggggggcgggctccgctggtcggaccatttctat
tacgtccaggacgtcgacatcttcgactggccgcagaatcccttcatcggcctcgccgcc
tccggggccggctactacggcacgccgggcgtcctccgggaccgcgacgcgcggacacag
aacctcgccggggacaagatcgccttcaccgtcgagccgaccgaatcgaacaccctcctc
gccggcgtcgacctcgagcacggctggctcgagaacacccgctcccgcgtcgccgccccc
ggctacccggcggcgaatcccttcgcccccgccgtcaacctcccgccgaccgagtacaac
aacgagagctacatggccgccgtctacgccgaggacgcccagcggttcctcgacgaccgc
ctcgtcctccaggcggggggccgcttccagttcacgaacgcgaagctcctcggcaccgag
taccagaccgcctccttcgactcggcggcgcggaacgccggttcggggacctaccgcgtc
gcctcggcctacgaggtgcggaagggatggaagctccgggcgagcgtcggcaccggcttc
cgcgccgtcacccccggggagctccactccgcgacgcagcaggggaacggcttcaccgtg
tcgggcaacccgaacctcaaggacgaatacagcctcacctcggaatacggcgtccacggc
gaggaggggccgctctccgccgacctcgcctacttccgcaacacgatccacaacagcgtc
gtctccctcccgacggcgacccccctcgtctacacgtggcgcaacatcgaccgggagaag
atcagcggcctcgaggcggcgttctcctacgacctcgcccgcctcggcaagtgggccggc
taccggctggagccctacgccacggggagcaagctcttccagttcgacggcgagggggtc
ccctacgcactgagcgattcccacatgttgaagatcgacgactaccaggcgaccctcggc
ctccgcggcgggaagatcgggaagtggagcagcgactggtacgccgtctggtccggcccg
agctacgagagcgccgcctccgagggctacaccgccgacagccacctcatctcccaggtc
ccgtcctggtgggtcctcaacatgcggcagagctacgaggtcaccgcctccctgagcctc
ttcttcgggatcaacaacctcctcgaccgcgattacgatcccgcctccctcggcctgaac
cgggcgaactcgggcatcctcccgaaggcgaccgccgggggcctcgggtcgagcgcgccg
gggcgggaattccttggcggcttcgtcgtctcgttttaa
DBGET
integrated database retrieval system
