KEGG   Verrucomicrobium sp. GAS474: SAMN05444156_0941
Entry
SAMN05444156_0941 CDS       T09813                                 
Name
(GenBank) type II secretion system protein D
  KO
K02453  general secretion pathway protein D
Organism
veg  Verrucomicrobium sp. GAS474
Pathway
veg03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:veg00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SAMN05444156_0941
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:veg02044]
    SAMN05444156_0941
Secretion system [BR:veg02044]
 Type II secretion system
  General secretion pathway protein
   SAMN05444156_0941
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 Stv
Other DBs
NCBI-ProteinID: SDT94288
LinkDB
Position
I:1123540..1125723
AA seq 727 aa
MKRSFPGLGLAGALVALFLAPALAPGASASPEREGPAWKAQDEGAVVDIQLPNAPINDIL
STYEALTGKTLVRDANLSGPNLTITSGRKLTKGQAIRLIESALLLNGYALVPGTDGTVKV
VNGGGGKSPRSEGIPVLASASDLPEGDQVVSLYLPLRFVTPADASAILQAHLTPHSYGAI
VQVAGAQALVVTESSPVLREILKLKDLIDVPPIEIPPPKLTKEFVPLRRADAEKVADTLN
KLLEAQKKAASAAGSPPAQGQPNAGLHGGNLLVLGDVQLVADGRTNRILVITRPANFPLI
KELIEQFDQSVEIEAPYIRSLKYVSALDVLTVLQRFLVESKDEVSGIAEAGGKAAGAKPV
PGPASRPGSSPTGMQERLDEQADEQPPQEITVGKTRLIADNKTNTLLVFGPPDSVSRART
IIDNLDIRPRQVYLATVVGKLSLTNSSELSVDLLQNFHSLSGNVGAAASSQNSTLAARSD
PRSLAAALAFPAGTGLAFYGAVGNTLNAYVKALESTGRFTILSRPSVYTANNKKASISSG
QQVPIPQSTLSSLDSATANNVAQSSTIEYKDVELLLEVIPLINSEREVTLRISQQNSTIS
GSSTISGNTVPIISKDALETTVTTPNRSTVILGGLIKDSDQASRSGVPLLKDIPFLGALF
RSDTKNRERDELVILIQPTVVETDEDLARAQAEEKSRATLGEAAERYAAKPASAVTGKST
ALESLTH
NT seq 2184 nt   +upstreamnt  +downstreamnt
atgaaacgctcctttcccggcctcggcctggcgggggctctcgtggccctcttcctcgcc
ccggctctcgcgccgggcgcatcggcctcgccggagcgcgaaggcccggcctggaaggcc
caggacgagggggccgtcgtcgacatccagttgcccaacgcgccgatcaacgacatcctc
tccacctatgaggccttgaccgggaaaacgctggtgcgggatgcgaacctctccggcccg
aatctcacgatcacttcgggcaggaagctcacgaaaggccaggcgatccgcctcattgaa
agtgctctccttctcaacggctacgcgctcgttcccggaacggacggaaccgtgaaagtc
gtgaacggcggaggcggaaaatccccgcgcagcgagggaatccccgtcctcgcctccgcc
tccgacctgcccgagggggatcaggtcgtcagtctctacctcccgctccgcttcgtcact
cccgccgacgcctccgccatcctccaggcccacctcacgccccattcctacggtgcgatc
gtccaggtggccggtgcccaggccctcgtcgtcaccgagagcagcccggttctccgcgag
atcctgaagctgaaggacctgatcgatgtcccgcccatcgagatccccccgccgaaactg
accaaggaattcgtccccctccgccgggccgacgccgaaaaggtggccgacacgctgaac
aagcttctcgaagcccagaaaaaggcggcctccgcggccggatccccacccgcgcagggc
cagcccaatgccggccttcacggcggcaacctcctggtcctcggcgatgtccagctcgtc
gccgacgggcggacgaaccgcatcctggtcatcacccgcccggccaactttcctctcatc
aaggagctcatcgagcagttcgaccagagcgtcgagatcgaagctccctacatccgctcc
ctcaagtacgtctccgccctcgatgtcctgactgtcctgcagcggttcctcgtcgagtcg
aaggacgaggtctccggcatcgccgaggccgggggcaaggccgccggcgccaagccggtt
cccggtccggcgagccgtcccggctcctcccccaccggcatgcaggagcgtctcgacgag
caggcggacgagcagcccccgcaggaaatcaccgtcggaaaaacccgcctcatcgccgac
aacaagaccaacaccctcctcgtcttcggcccgccggacagcgtctctcgcgcgcgcacg
atcatcgacaacctcgacatccgcccgaggcaggtctatctcgccacggtcgtcggcaag
ctcagcctcacgaattcctccgagttgagcgtcgatctcctgcagaattttcactccctt
tcgggcaacgtgggcgccgccgcttcgtcgcaaaacagcaccctcgccgcccgctccgat
ccccggtccctcgccgcggccctcgccttccccgccgggacggggctcgctttctacggc
gccgtcggcaatacgctcaacgcctacgtcaaggcgctcgaaagcaccggccgcttcacc
atcctctcccgtccctccgtctacaccgcgaacaacaagaaggcgtcgatctcgtccggc
cagcaggtgcccattccgcaaagcaccctcagctccctcgactcggccacggccaacaac
gtcgcgcagtcctcgaccatcgagtacaaggacgtcgagctcctgctcgaggtgatcccc
ctcatcaattcggagcgcgaggtgacgctccggatctcccagcagaacagcaccatctcc
ggaagctcgacgatctcgggcaacacggtcccgatcatctcgaaggacgccctcgagacg
accgtgacgacgcccaaccggagtaccgtcatcctcggcggactgatcaaggactccgac
caggcgagccgctcgggcgtcccgctgctgaaggacatccctttcctcggcgccctcttc
cgcagcgataccaagaaccgggagcgcgacgagctcgtcatcctcatccagccgaccgtc
gtcgagaccgacgaggatctggcccgcgcccaggccgaggaaaaaagccgcgccaccctc
ggcgaggccgctgaacgttatgccgccaagcccgcctccgccgtcaccggcaagtcgacc
gcgctcgaatccctcacccattga

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