Verrucomicrobium sp. GAS474: SAMN05444156_1048
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Entry
SAMN05444156_1048 CDS
T09813
Name
(GenBank) peptidoglycan glycosyltransferase/cell elongation-specific peptidoglycan D,D-transpeptidase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
veg
Verrucomicrobium sp. GAS474
Pathway
veg00550
Peptidoglycan biosynthesis
veg01100
Metabolic pathways
veg01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
veg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SAMN05444156_1048
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SAMN05444156_1048
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
veg01011
]
SAMN05444156_1048
Enzymes [BR:
veg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SAMN05444156_1048
Peptidoglycan biosynthesis and degradation proteins [BR:
veg01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SAMN05444156_1048
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GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
SDT95625
UniProt:
A0A1H2EKJ5
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All DBs
Position
I:1283867..1285783
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AA seq
638 aa
AA seq
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MPFPVPTLRRAARASVVGLIFALPGLAQSQSAAPDPSPISAAAAAPASVPAPSPARDADT
PNPIPRIIEYRLPALRGNIVTSEGDLLASTVATQNLVLAWPSLSLVSTAEAASAWAQPEI
ARAAQWLGTPPPAALTDDVLQKLYAYRRFQPIIVSESLTPQQIAAFPASGLAQAGFALQD
TWRRSYPMGDLGVHLVGTVKRTQARSRGPYHQGEVGYSDYKGGSGLEEAFNTALRGTDGR
MTIRTTADGLPQSTTIPVPPTAGNTVRTTLRTRIQQEAESTMKAVPRGAMIILDARTGDV
VASVSRPGYDPNAFLPAVSPELWSRLSEDPARPLLNRVTFQQQPPGSTFKLVTSLAALRA
GVLDPNDKFTTNGTYKVGNVEYHIPDEVGTYAYREALAHSINIYFFRLGLMVGRDNLVST
AKELGIGRPTGFVLGDAPGRMPDEAYVLANHQRSFGPGDVTNTAIGQGDVLMTPIQIAHL
AELIANEGAAFEPRLVSAIEDGAGHPVQEFPPKPEPVFPLPAADWKTLKSAMQAVTEIGT
GVKALPDGTRLSGKTGTAQVGTKEEPRQIAWFMGYVPSDNPQYAFVVMVEGSKKESLWGA
DAAAPLINQVFSVVYAKRAVPIGAVPDTTQNDGAPRPQ
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgcctttccccgtcccgactctacgccgtgccgcaagggcctccgtcgtcgggctgatt
ttcgcccttcccggccttgcccaatcccagtccgccgcgcccgatccgagtccgatttcg
gctgcggctgcggccccggcctccgttcccgctccttcccccgcgcgcgacgccgacacg
cccaacccgatcccccggatcatcgaataccgcctcccggcgctccggggaaacatcgtc
acctcggagggcgatctcctcgcctcgacggtggcgacgcagaacctcgtcctcgcctgg
ccctcgctcagcctcgtctcgaccgccgaggcggcctccgcctgggcgcagcccgaaatc
gcccgcgccgcccaatggctcgggacgccgcccccggcggccctcaccgacgacgtcctc
cagaagctctatgcctaccgccgcttccagccgattatcgtctcggaaagcctcaccccg
cagcagatcgcggcgttcccggccagcggcctcgcccaggcgggcttcgccctccaggac
acgtggcggcggagctatccgatgggggacctcggcgtccacctcgtcggcacggtgaag
cggactcaggcgcggagccgcggcccctaccaccagggcgaggtcggctacagcgactac
aagggcggctccggcctcgaggaggcgttcaacaccgcgctgcgcggcaccgacgggagg
atgacgatccgcaccaccgccgacggccttccccagagcacgacgatccccgtcccgccg
acggcggggaacaccgtccgcaccaccctccgcacccgcatccagcaggaggccgagagc
acgatgaaggcggtcccgcgcggcgcgatgatcatcctcgacgcccgtaccggcgacgtc
gtcgcctcggtgagccggcccggctacgatccgaacgccttcctccccgccgtctccccc
gagctctggagccgcctgagcgaggacccggcccggcccctgctgaaccgcgtcaccttc
cagcagcagccccccggctcgaccttcaagctcgtcacctccctcgccgcgctccgggcg
ggggtcctcgacccgaacgacaagttcacgacgaacgggacctacaaggtcggcaacgtc
gagtaccacatccccgacgaggtcggcacctacgcctaccgggaggccctcgcccactcg
atcaacatctacttcttccgcctcggcctgatggtcggccgggacaatctcgtcagcacg
gcgaaggaactcggcatcggccgccccaccggcttcgtcctcggcgacgccccgggccgg
atgcccgacgaggcctacgtcctggccaaccaccagcggagcttcggccccggcgacgtg
acgaacaccgccatcggccagggcgacgtcctgatgacgccgatccagatcgcccacctg
gccgagctgatcgcgaacgagggggcggccttcgagccccgccttgtctcggcgatcgag
gacggcgcgggccatccggtccaggaattcccgccgaagcccgagccggtcttccccctt
cccgccgccgactggaagacgctgaagagcgccatgcaggccgtcaccgaaatcgggacc
ggggtgaaggccctccccgacggcacccgcctctccgggaagaccgggacggcacaggtg
gggaccaaggaggaaccccgccagatcgcctggttcatgggttacgttccctcggacaat
ccccaatacgccttcgtcgtcatggtcgaggggagcaagaaggagagcctctggggggcc
gacgcggcggcgccgctgatcaaccaggtcttcagcgttgtttacgcgaagcgggcggtg
ccgatcggggcggtgcccgatacgacgcagaacgacggcgcgccccgcccgcaataa
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