Verrucomicrobium sp. GAS474: SAMN05444156_1301
Help
Entry
SAMN05444156_1301 CDS
T09813
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
veg
Verrucomicrobium sp. GAS474
Brite
KEGG Orthology (KO) [BR:
veg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
veg03110
]
SAMN05444156_1301
Chaperones and folding catalysts [BR:
veg03110
]
Heat shock proteins
HSP100
SAMN05444156_1301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
AAA_16
AAA_14
nSTAND3
Sigma54_activat
TniB
IstB_IS21
Mg_chelatase
Zeta_toxin
ATPase_2
RuvB_N
AAA_28
AAA_7
AAA_18
TsaE
RNA_helicase
AAA_24
T2SSE
bpMoxR
ABC_tran
AAA_19
AAA_23
NBD_SMAX1
ABC_tran_CTD
ResIII
CbiA
DNA_pol3_delta2
CENP-F_leu_zip
DUF7491
Motif
Other DBs
NCBI-ProteinID:
SDT99182
LinkDB
All DBs
Position
I:complement(1556265..1558895)
Genome browser
AA seq
876 aa
AA seq
DB search
MDPNKFTEKAQVAIAETQSEAARRSHASVDVEHLLAALLAQDEGLAPRLFSRANVPAEVL
QDRLEDELAKLPTVTGAGQSAGVHITQRLNKLLVSAQDEAKRLKDDYVSVEHLILPMFDE
ASSTPVGRIFKALGAKKDAFLKAMAEVRGNQRVTTANPEATYEALEKYGRDLTKAAAAGK
LDPVIGRDAEIRRAIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIIARDVPESLKDKK
IVSLDLGALIAGAKFRGEFEERLKAVLQEVTQSEGQIILFIDEIHTVVGAGKAEGSMDAG
NMLKPMLARGELHCIGATTLDEYRKYIEKDAALERRFQPVLVAEPTVEDTVSILRGLARR
YELHHGVRIQDGALVSAATLSHRYIADRFLPDKAIDLIDEAAAKLKTEIESMPEELETLE
RRTLRLEIEQEALKKEKDASSKTRLAALQKELADVRADRDALKARWQAEKASVTGLQTLR
GEQEKLLIEIDQAERNHDLNKVAELRYGKLPELERKISAAEEKAKADAAKADGSDKSARL
IQEEVTEQEIAEVVARWTGVPVARLLEGERDKLLRLDAILHERVIGQDEAVSAVADAVIR
ARSGLKDPKRPIGSFLFLGPTGVGKTELARALAQALFDSEDNIVRIDMSEYMEKHSVAKL
VGAPPGYVGYEEGGQLTEAVRRRPYTVILFDEIEKAHGDVFNIMLQVLDDGRLTDSQGRT
VDFKNTLLIMTSNIGSPYLIEGATEDGEIPEKTREKVMGELRSHFRPEFLNRIDDVVLFK
PLTLAEITKIVDLLIGSLRRRLDDRAITITLTAAAKTHLAKAGYSPVYGARPLKRLIQKE
LETALSRKLLSGEVKDGSTVKVDAKGEELLFTTQAG
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggatccgaacaagttcaccgaaaaggcccaagtcgccatcgccgagacccagtccgag
gccgcccgccgcagccacgcctccgtcgatgtcgagcatctcctcgccgccctcctggcg
caggacgagggcctcgccccccgcctcttctcccgcgcgaacgtccccgccgaggtcctg
caggatcggctcgaggacgagctcgcgaagctcccgaccgtcaccggcgcggggcagtcg
gcgggcgtccacatcacgcagcggctgaacaagctcctcgtctccgcccaggacgaggcg
aagcggctgaaggacgactacgtctcggtcgagcacctcatcctccccatgttcgacgag
gcgtcgtcgacccccgtcgggcggatcttcaaggctctcggggcgaagaaggacgccttc
ctcaaggcgatggccgaggtccggggcaaccagcgggtcaccaccgcgaacccggaggcg
acctacgaggcgctcgagaaatacgggcgcgacctgacgaaggccgccgccgccgggaag
ctcgaccccgtcatcgggcgcgacgccgagatccggcgcgcgatccaggtcctctcccgc
cggacgaagaacaaccccgtcctcatcggcgagcccggcgtcggcaagacggcgatcgtc
gagggcctcgcccagcggatcatcgcccgcgacgtgccggagagcctgaaggacaagaag
atcgtctccctcgacctcggcgccctcatcgcgggggcgaagttccggggcgagttcgag
gaacggctcaaggccgtcctccaggaagtgacccagtccgaggggcagatcatcctcttc
atcgacgagatccacaccgtcgtcggcgcggggaaggccgagggctcgatggacgccggg
aacatgctgaagccgatgctcgcccgcggcgagctccactgcatcggcgcgacgaccctc
gacgagtaccggaagtacatcgagaaggacgccgccctcgagcgccgcttccagcccgtc
ctcgtcgccgaaccgacggtcgaggacaccgtctcgatcctccgcggcctcgcccgccgc
tacgagctccaccacggcgtccgcatccaggacggcgcgctcgtctccgccgccaccctc
tcccaccgctacatcgccgaccgcttcctccccgacaaggcgatcgacctcatcgacgag
gccgccgcgaagctcaagaccgagatcgagagcatgcccgaggaactcgagaccctcgaa
cgccgcaccctccgcctcgagatcgagcaggaggcgctgaagaaagaaaaggacgcctcg
tcgaagacccgcctcgccgcgctccagaaggagctggccgacgtccgcgccgaccgcgac
gccctgaaggcccggtggcaggccgagaaggcgagcgtcaccggcctccagaccctccgg
ggcgagcaggaaaagctcctcatcgagatcgaccaggccgagcgcaaccacgacctgaac
aaggtcgccgaactccgctacgggaagctccccgagctcgagcggaagatctccgccgcc
gaggaaaaggcaaaggccgacgccgcgaaggccgacggctccgacaagtcggcccgcctc
atccaggaggaggtcaccgagcaggagatcgccgaggtcgtcgcccgctggaccggcgtc
cccgtcgcccgcctcctcgagggggaacgggacaagctcctccgcctcgacgccatcctc
cacgagcgggtcatcggccaggacgaggccgtcagcgccgtcgccgacgccgtcatccgc
gcccgctccgggctgaaggacccgaagcgccccatcggctccttcctcttcctcggcccc
accggcgtcgggaagaccgagctcgcccgcgccctcgcccaggccctcttcgacagcgag
gacaacatcgtccgcatcgacatgagcgaatacatggagaagcactccgtcgcgaagctc
gtcggcgcccctcccggctacgtcggctacgaggagggcggccagctcaccgaggccgtc
cggcgccgcccctacaccgtcatcctcttcgacgagatcgagaaggcccacggcgacgtt
ttcaacatcatgctccaggtcctcgacgacggccgcctcaccgactcccagggccgcacc
gtcgacttcaagaacaccctcctcatcatgacctcgaacatcgggagcccgtatctcatc
gaaggggccacggaggatggcgagatccctgaaaagacccgggagaaagtcatgggcgaa
ctccgttcccatttccgtcccgagttcctgaaccggatcgacgacgtcgtcctcttcaag
cccctcaccctcgccgagatcacgaagatcgtcgacctcctcatcggctccctgcggcgg
cggctcgacgaccgcgccatcaccatcaccctgacggcggcggcgaagacccacctcgcc
aaggccggctacagccccgtctacggcgcgcgcccgctgaagcggctcatccagaaggaa
ctcgagaccgccctctcccggaagctcctctccggcgaggtgaaggacggcagcaccgtg
aaagtcgacgccaagggggaagagttgctcttcaccacccaggcgggataa
DBGET
integrated database retrieval system
