Verrucomicrobium sp. GAS474: SAMN05444156_1394
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Entry
SAMN05444156_1394 CDS
T09813
Name
(GenBank) tRNA pseudouridine38-40 synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
veg
Verrucomicrobium sp. GAS474
Brite
KEGG Orthology (KO) [BR:
veg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
veg03016
]
SAMN05444156_1394
Enzymes [BR:
veg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SAMN05444156_1394
Transfer RNA biogenesis [BR:
veg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SAMN05444156_1394
Prokaryotic type
SAMN05444156_1394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
SDU00566
UniProt:
A0A1H2EZJ5
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All DBs
Position
I:1658492..1659313
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AA seq
273 aa
AA seq
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MAGHKLTIAYDGAAFNGWQRQAGHPSIQQTVEEVIARIWNRPISIEGSGRTDTGVHAVGQ
VAGFTAPRKLAAPVLLRALNDHLPFAIRVTKAEFLEPSFHARFDVREKTYEYRVHNAPFS
DPFLVDRVWHLPMPLDFAAMEAAAAHLRGEHDFAAMASNAGYARTTTVRTISELAISRRG
PLVLFRVTADGFLYHMVRNIVGALTRVGRGKLSPADFGKIVRAGKRTAAPASAPAMGLYL
MKVGYYPKPVRLQRAKNRRDPTWLPEPDADDAE
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcacaagctgaccattgcctacgacggggccgccttcaacggctggcagcgc
caggcgggccacccctcgatccagcagaccgtggaggaggtgatcgcgcggatctggaat
cgcccgatctcgatcgagggctcgggccggaccgacaccggggtccacgccgtcggccag
gtcgccgggttcaccgcgccccggaagctggcggccccggtcctcctccgcgcgttgaac
gaccaccttcccttcgcgatccgggtgacgaaggccgagttcctggagccgagcttccac
gcccgcttcgacgtccgggagaagacctacgaataccgcgtccacaacgcccccttcagc
gatcccttcctcgtcgaccgcgtctggcacctgccgatgccgctcgatttcgcggcgatg
gaggccgccgccgcccacctgcgcggggagcacgatttcgccgcgatggcctcgaacgcc
ggctacgcgcggacgacgacggtgcggacgatctccgagctcgcgatttcccgcaggggg
ccgctcgtcctcttccgcgtcaccgccgacggcttcctctaccacatggtgcggaacatc
gtcggggccttgacccgggtgggacggggaaagctctcgcccgccgacttcggcaagatc
gtgagggcgggcaagcggaccgccgcccctgcctcggcccccgcgatggggctctacctc
atgaaggtcggctactacccgaagccggtccgtctccaacgggccaagaaccggcgggac
ccgacgtggctgccggaaccggacgccgacgacgcagagtga
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