KEGG   Verrucomicrobium sp. GAS474: SAMN05444156_1413
Entry
SAMN05444156_1413 CDS       T09813                                 
Name
(GenBank) ribonucleoside-diphosphate reductase class II
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
veg  Verrucomicrobium sp. GAS474
Pathway
veg00230  Purine metabolism
veg00240  Pyrimidine metabolism
veg01100  Metabolic pathways
veg01232  Nucleotide metabolism
Module
veg_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Brite
KEGG Orthology (KO) [BR:veg00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    SAMN05444156_1413
   00240 Pyrimidine metabolism
    SAMN05444156_1413
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:veg03400]
    SAMN05444156_1413
Enzymes [BR:veg01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     SAMN05444156_1413
DNA repair and recombination proteins [BR:veg03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    SAMN05444156_1413
SSDB
Motif
Pfam: Ribonuc_red_lgC ATP-cone Ribonuc_red_lgN RNR-II_ins_dom
Other DBs
NCBI-ProteinID: SDU00862
LinkDB
Position
I:1684796..1687768
AA seq 990 aa
MSMSDAPKGQMNLTGIDPLQEREFTIRKRSGRVETFNEERIFLAVEAAFKAEREVAGANP
LTEADHLAVRQVTDRVVEQALAFAVQGEQLEIERIQDLVELQLMKGGHLGIARRYIIYRE
ERRLARALRGDKDLSGQPQASVMVTRSNGQQEPLDTQRVRRELMQACRGLEDRCSWREMA
DEALVTLYDGVRTSEVAQSMVMTAKSRIEREPAYTYVAARLLLNKVYREVLPAESLREYG
VDIAAIHTAHFADYVKHGVEVGRLHADLLGFDLPRIAAALRIERDEKFTYMGIQTVYDRY
LLHDHGRRIESPQYFWMRVSMGLAMREGDRKDERAIEFYEVLSSFLLTSSTPTLFNAGTL
HPQLSSCYLSTVMDDLDHIFKVVADDAKLSKWAGGLGNDWSNIRATGSVIKGTNGTSQGV
IPFLKVANDTAVAVNQGGKRKGAMCAYLETWHLDVEDFLELRKNTGDERRRTHDMNTANW
IPDLFMKRVASGGTWTLFSPSDVKDLHDLYGAAFEARYTEYEGRADRGEIKLFKRIDAMQ
LWRKMLTMLFETGHPWITFKDPSNVRSPQDHAGVVHSSNLCTEILLNTSEAETAVCNLAS
VNLPNHIVDGRFDEELVAKTIKTGMRMLDNVIDINYYPTPEAKASNLKHRPVGLGLMGFQ
DALYKLRISYASQAAVEFADKSMEVISYYAILASSELAAERGTYESYKGSKWDRGLLPID
TIDLLERERGGEVDVDRSSTMDWAVVRESLKKHGMRNSNTMAIAPTATISNITGVSQSIE
PTYKNLYAKSNLSGEFTTVNTYLIEDLRALGIWDSEMLDDLKYFDGSLLEIERVPDAIKE
VYRTSFEIDPVWIVEAASRRQKWIDMGQSLNLYIAAPSGKKLNDMYFLSWRKGLKTTYYL
RSVAATSVEKSTLDVNRRGLQPRWMKNKSASSNIKVDRAEEAAEVPAATVPQASPMPAVA
KVSEDDITAGPGVEAPKACSLDNPDCESCQ
NT seq 2973 nt   +upstreamnt  +downstreamnt
atgtcgatgagtgatgcgcctaaaggtcagatgaatttgacggggatcgatcccctccag
gagcgggaatttacgatccgcaagcggagcggccgcgtggagacgttcaacgaggagcgg
atcttcctcgccgtcgaagccgccttcaaggcggagcgcgaggtcgccggggcgaatccg
ctcaccgaggccgatcacctcgccgtccgccaggtcaccgaccgcgtcgtcgagcaggcc
ctcgccttcgccgtccagggggagcagctcgagatcgagcggatccaggacctcgtcgag
ctccagctcatgaagggcggccacctcggcatcgcccgccgctacatcatctaccgcgag
gagcgccgcctcgcccgcgccctccgcggggacaaggacctctccggccagccgcaggcc
agcgtcatggtcacccgttccaacggccagcaggaacccctcgacacgcagcgcgtccgc
cgcgagctgatgcaggcctgccgcggcctcgaggaccgctgctcctggcgcgagatggcc
gacgaggccctcgtcaccctctatgacggcgtccgcacctccgaggtcgcccagtcgatg
gtcatgacggcgaagtcccgcatcgagcgggagcccgcctacacctacgtcgccgcccgc
ctcctcctgaacaaggtctaccgcgaggtcctccccgccgagtcgctccgcgaatacggc
gtcgacatcgccgcgatccacacggcccacttcgccgactacgtgaagcacggcgtcgag
gtcggccgcctccatgccgatctcctcggcttcgacctcccccggatcgccgccgcgctc
cgcatcgagcgggacgagaagttcacctacatggggatccagacggtctacgaccgctac
ctcctccacgaccacggccgccggatcgagtccccccagtacttctggatgcgcgtctcg
atgggcctcgccatgcgcgagggcgaccggaaggacgagcgggcgatcgagttctacgag
gtcctctcctcgttcctcctcacctcgtcgacgccgacgctcttcaacgccggcaccctc
catccccagctcagctcctgctacctctcgacggtgatggacgacctcgaccacatcttc
aaggtcgtcgccgacgacgcgaagctctccaagtgggcgggcggcctcggcaacgactgg
tcgaacatccgcgccaccggctccgtcatcaaggggacgaacggcaccagccagggcgtc
atcccgttcctcaaggtcgcgaacgacaccgccgtcgccgtcaaccagggcggcaagcgg
aagggcgcgatgtgcgcctacctcgagacgtggcacctcgacgtcgaggacttcctcgag
ctccgcaagaacaccggcgacgagcgccgccgcacgcacgacatgaacacggcgaactgg
attcccgacctcttcatgaagcgcgtcgcctccggcggcacctggaccctcttcagcccg
agcgacgtcaaggacctccacgacctctacggcgccgccttcgaggcccgctacaccgag
tacgagggccgtgccgaccgcggcgagatcaagctcttcaagcggatcgacgcgatgcag
ctctggcgcaagatgctgacgatgctcttcgagacgggccacccctggatcaccttcaag
gatccctcgaacgtccgctccccccaggaccacgccggcgtcgtccacagctcgaacctc
tgcaccgagatcctgctgaacacctcggaagccgagaccgccgtctgcaacctcgcctcg
gtcaacctgccgaaccacatcgtcgacgggcgcttcgacgaggagctcgtcgccaagacg
atcaagaccggcatgcggatgctcgataacgtcatcgacatcaattactatccgaccccc
gaggcgaaggcctcgaacctgaagcaccgccccgtcggcctcggcctcatgggcttccag
gacgcgctctacaagctgcggatctcctacgccagccaggcggcggtcgagttcgccgac
aagagcatggaggtcatctcctactacgccatcctcgcctcctcggagctggcggcggag
cgcggcacctacgagagctacaagggctcgaagtgggatcgcggcctcctccccatcgac
accatcgacctcctcgagcgcgagcgcggcggcgaggtcgatgtcgaccgctcctccacg
atggattgggccgtcgtccgcgagtcgctgaagaagcacgggatgcggaacagcaacacg
atggcgatcgccccgacggcgacgatctcgaacatcaccggcgtctcccagtcgatcgag
ccgacctacaagaacctctacgcgaagtcgaacctctcgggcgagttcaccaccgtgaac
acctacctcatcgaggacctccgcgccctcgggatctgggactcggagatgctcgacgac
ctgaagtacttcgacggctccctcctcgagatcgagcgggtgcccgacgcgatcaaggaa
gtctaccggacctccttcgagatcgaccccgtctggatcgtcgaggcggccagccgccgc
cagaagtggatcgacatgggccagtccctcaacctctacatcgccgccccgagcggcaag
aagctcaacgacatgtatttcctgtcgtggcgcaaggggttgaagacgacctactacctc
cgctccgtcgcggcgacctcggtcgagaaatcgaccctcgacgtcaaccggcgcggcctc
cagccccgctggatgaagaacaagagcgcctcgtcgaacatcaaggtcgaccgggccgag
gaagccgccgaggtccccgcggccacggttccccaagcctcgccgatgcccgccgtcgcc
aaggtttccgaggacgacatcacggccgggccgggcgtcgaggccccgaaggcctgctcg
ctcgacaaccccgactgcgaatcgtgccagtaa

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