Verrucomicrobium sp. GAS474: SAMN05444156_1585
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Entry
SAMN05444156_1585 CDS
T09813
Name
(GenBank) transcriptional regulator, TetR family
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
veg
Verrucomicrobium sp. GAS474
Brite
KEGG Orthology (KO) [BR:
veg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
veg03000
]
SAMN05444156_1585
Transcription factors [BR:
veg03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
SAMN05444156_1585
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GFIT
Motif
Pfam:
TetR_N
TetR_C_13
TetR_C_13_2
DUF2497
DUF6262
Motif
Other DBs
NCBI-ProteinID:
SDU03636
LinkDB
All DBs
Position
I:1886192..1886761
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AA seq
189 aa
AA seq
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MRYDKGHKEETRKKIVEVASAAFRREGIDGIGVADVMKRAGLTHGGFYSHFKSKEELVKE
AVASAFSQSRLRKGREEGKSVEELIRSYLRPEHRDRLDGGCAMAALVGDFARRPKANRED
FATRIGRMIGLIEEVLPSALSPAARKKKATGIVATLVGALQLARTETDPKASDAILEAGI
DAALSQVNS
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgcgctacgacaaaggacacaaggaagagacgcggaagaagatcgtcgaggtcgcctcc
gccgcctttcgccgcgaggggatcgacggcatcggcgtcgccgacgtgatgaagcgggcc
gggctgacccacggcggcttctacagccacttcaagtcgaaggaggaattggtgaaggag
gccgtcgcctccgctttttcccaaagccgcctccgcaaggggcgggaggaggggaagagt
gtcgaggaactgatccgcagctacctccggcccgagcaccgggaccggctcgacgggggg
tgcgcgatggccgccctcgtcggcgatttcgcccgccgcccgaaggcgaaccgcgaggac
ttcgccacgcggatcggacggatgatcggcctcatcgaggaggtcctgccttccgccctt
tccccagcggcgcggaagaagaaggcgacgggaatcgtcgccaccctggtcggcgccctc
cagctggcccggaccgagaccgatccgaaggcctccgacgcgatcctcgaggcgggcatc
gatgccgcgctgagccaagtgaactcctaa
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