Verrucomicrobium sp. GAS474: SAMN05444156_1647
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Entry
SAMN05444156_1647 CDS
T09813
Name
(GenBank) Glycine/serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
veg
Verrucomicrobium sp. GAS474
Pathway
veg00260
Glycine, serine and threonine metabolism
veg00460
Cyanoamino acid metabolism
veg00630
Glyoxylate and dicarboxylate metabolism
veg00670
One carbon pool by folate
veg00680
Methane metabolism
veg01100
Metabolic pathways
veg01110
Biosynthesis of secondary metabolites
veg01120
Microbial metabolism in diverse environments
veg01200
Carbon metabolism
veg01230
Biosynthesis of amino acids
veg01240
Biosynthesis of cofactors
veg04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
veg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SAMN05444156_1647
09102 Energy metabolism
00680 Methane metabolism
SAMN05444156_1647
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SAMN05444156_1647
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SAMN05444156_1647
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SAMN05444156_1647
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SAMN05444156_1647
Enzymes [BR:
veg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SAMN05444156_1647
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GFIT
Motif
Pfam:
SHMT
LMWPc
LacAB_rpiB
Beta_elim_lyase
Aminotran_1_2
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
SDU04655
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All DBs
Position
I:1952327..1954537
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AA seq
736 aa
AA seq
DB search
MKNVLFVCTGNICRSPMAEGLFRDLVKGKKDIVVSSGGIGAVNGQPPSSYSVDAVSEIGV
DIGSIRSRSITGDIVRKADFIFCMTYGHLDSMLLLFPHAAEKIYLVREFENGLSASSREI
SDPIGCSREVYRRCRDQIARALPSVLDFVLSSPAPGGDGDSGGLARKVFLVADRSPFSPP
IREALYGWLLRQGVPFEDCTPRPGKGAEGAASGFIDRVRRVALAVAQGEARLGILIGEAP
AKLVDLANRVGGVRAVAVGDAKSAVSAVLDREANVLCLAAKEVKPQRALEILTAWLNAAN
AENEDEKPTLMEADIVTNPAPSFNPPPSLKESDPAIAALIAKEAGRQFEGIELIASENFT
SRAVMEAQGSCLTNKYAEGYPGRRWYGGCEYVDEIEQIAIDRAKELFGAEYVNVQPHSGS
QANMAVYFAFIKPGDTILTMDLSHGGHLTHGNKMNFSGRFYNVVHYGVSQETGYIDYDAL
AEQAAETKPKLITAGASAYPRIIDFARMSEIAKSVGALLFIDMAHIAGLVAAGVHPSPIP
HADFVTTTTHKTLRGPRGGLIMAKAQYGKDLDSHVFPGIQGGPLMHVIAAKAVCFGEALK
PGFKAYQEQVVRNAKALSEGLKKNGYKILSGGTDNHLMLVDLRPTEITGKEAQETLDKAA
ITINKNSIPFDTVSPFKGGGIRLGTPAVTTRGMGPDEMFDIANWIDEALKNRTDEAKLAA
IAKRVHELTARFPLPY
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgtcctctttgtctgcaccggcaatatctgccgcagcccgatggcggaaggg
ctcttccgcgatctggtgaaggggaagaaggacatcgtcgtcagctccggcgggatcggc
gcggtgaacgggcagccccccagcagctactccgtcgacgccgtctccgagatcggggtc
gacatcggctcgatccgcagccgctccatcaccggggacatcgtccgcaaggccgacttc
attttctgcatgacctacgggcatctcgactcgatgctcctcctcttcccccacgcggcg
gagaagatctacctcgtccgcgagttcgagaacggcctctcggcctcctcccgggagatc
tccgatccgatcggctgctcccgcgaggtctaccgccgctgccgggaccagatcgcccgc
gcccttcccagcgtcctcgatttcgtcctctcgtcccccgccccggggggagacggggac
tcgggcggcctggcgcggaaggtcttcctcgtcgccgaccggagccccttttcccccccc
atccgggaggccctctacgggtggctcctccggcagggcgtcccgttcgaggactgcacc
ccccgccctggcaagggcgcggaaggggccgcttccggcttcatcgaccgggtccgtcgc
gtcgccctcgcggtggcccagggggaggcccgcctcggcatcctgatcggggaggccccc
gcgaagctcgtcgacctggcgaaccgcgtcggcggcgtccgggccgtggcggtcggcgac
gccaaatcggccgtttcggccgtcctcgaccgggaggcgaacgtactttgtcttgccgca
aaagaggttaagccccaacgtgccttggagatcctcaccgcctggctcaacgccgccaac
gcggaaaacgaggacgagaaacccactcttatggaagccgacatcgtgacgaatcccgcc
ccctccttcaatccgcccccctccctcaaggagagcgatcccgccatcgccgccctcatc
gcgaaggaggcgggccgccagttcgaggggatcgagctgatcgcctcggagaacttcacg
agccgcgccgtcatggaggcccagggctcctgcctgacgaacaagtacgccgagggctac
cccggccgccgctggtacggcgggtgcgagtacgtggacgagatcgagcagatcgccatc
gaccgggcgaaggagctcttcggtgccgaatacgtcaacgtccagccccactccggctcc
caggcgaacatggccgtctacttcgccttcatcaagccgggcgacaccatcctcacgatg
gacctctcccacggcggccacctgacccacgggaacaagatgaacttctccggccgcttc
tacaacgtcgtccactacggcgtctcccaggagaccggctacatcgattacgacgccctc
gcggagcaggccgccgagacgaagccgaagctgatcacggcgggggcctcggcctacccc
cggatcatcgacttcgcccggatgagcgagatcgcgaagtcggtcggcgccctcctcttc
atcgacatggcccacatcgccggcctcgtcgccgccggggtccatccctcgccgatcccc
catgccgacttcgtcaccacgaccacccacaagaccctccgcggcccccgcggcggcctc
atcatggcgaaggcccaatacggcaaggacctcgactcccacgtcttccccggcatccaa
ggcggcccgctgatgcacgtcatcgcggcgaaggccgtctgcttcggcgaggcgctgaag
cccggcttcaaggcctaccaggagcaggtcgtccgcaacgcgaaggccctctccgagggg
ctgaagaagaacggctacaagatcctctccggcggcaccgacaaccacctcatgctcgtc
gacctccgccccacggagatcaccggcaaggaggcgcaggagaccctcgacaaggctgcc
atcacgatcaacaagaactcgatccccttcgataccgtctcccccttcaagggcggcggc
atccgcctcggcacccccgctgtgacgacgcgcggcatgggtcccgacgagatgttcgac
atcgcgaactggatcgacgaggcgctgaagaaccggaccgacgaggcgaagctcgccgcg
atcgccaagcgggtccacgaactcaccgcccgcttcccgcttccctactaa
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