KEGG   Verrucomicrobium sp. GAS474: SAMN05444156_1767
Entry
SAMN05444156_1767 CDS       T09813                                 
Name
(GenBank) type II secretion system protein D
  KO
K02453  general secretion pathway protein D
Organism
veg  Verrucomicrobium sp. GAS474
Pathway
veg03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:veg00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SAMN05444156_1767
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:veg02044]
    SAMN05444156_1767
Secretion system [BR:veg02044]
 Type II secretion system
  General secretion pathway protein
   SAMN05444156_1767
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: SDU06700
LinkDB
Position
I:2097602..2099938
AA seq 778 aa
MNTRLLIVLLSILGLVPLSSPAQEAPAAAPTPAPATPPAGGGGGGGFGGRFGRPGQGPGG
DSNVPVADKEDKVALQFPNNPATDLLAAYESLSGKTVIRDATLAGPSLTLVTAKRIPRIE
ALRLIESTLLLNGYSLIPGANNTMKIVNIAGKNPRSEGVPLLTRPEELPAGDQVVSFYLP
LEFISTNDALSVFQSSVTLHSYGAIVAVPTAHAIVITESSGTIREMLKLKVLIDVPPTKI
VSEFVLLRRADAQKVADALNKLLDSEKTAANAGANNINGGGGGFQPGGNPQQAFQAIARA
MSAAQSSAASNVAANPLASSNTRFVPDVRTNRILVVTEPYNFAPMKALVEGFDLSADVMD
PYSRPLRYIKAVDVLWTLANLISETKDDARDASSSASSAANLKSPSGNSTGTSNSSSSAS
GLSQVLTGDPTNIPPAAILVGTTRLIADNSTNSIIVIGPPESVTKVKGILDKLDVRPKQI
YLATVIGKMNLTNDAEISVNILQNYRNVSGNNGLATSSMNAGTSTLSSFPTPSTLNSAGA
FSFFNGLTLYGSLGNAMNYYVQALESTGRFTILSRPSVYTANNKKAYISSGQQVPIPQST
LSTLDTTSNNSVTQSSTITYKNAALLLEVIPLINSEKEVTLQIAVQNDSLNGSSTISGNT
IPIIASDSLKTTITVVNKATIVLGGLIRNQETKNRTGVPLLKDIPVLGALFRSDTNARDR
DELVVLLQPTVVETPEEEAALEKAESSSSGVGPRAKHYTSDPNKEIPEKATVLESITH
NT seq 2337 nt   +upstreamnt  +downstreamnt
atgaacacccgcctcctcatcgtcctcctttcgatcctcggcctcgtcccgctctcctcc
ccggcgcaggaggcccctgcggcggccccgactcccgcccccgccacgcctcccgccgga
gggggcggcggcggcggtttcgggggccgcttcggccgtcccgggcaggggcccggcggc
gatagcaacgttcccgtcgccgacaaggaagacaaggtcgccctccagttcccgaacaat
ccggcgaccgatctcctcgccgcctacgagagcctcagcgggaagaccgtcatccgcgac
gccaccctcgccgggccgagcttgaccctcgtcaccgcgaagcggatcccccggatcgag
gccctccgcctcatcgagagcaccctcctgctcaacggctactccctcattcccggcgcg
aacaacacgatgaagatcgtcaacatcgccgggaaaaatccccgctccgagggggtcccc
ctcctgacccggcccgaggagcttcccgccggggaccaggtcgtcagcttctacctcccg
ctcgagttcatctcgacgaacgacgccctctccgtcttccagtcctccgtcaccctccac
agctacggcgccatcgtcgccgtccccacggcccacgccatcgtcatcaccgagagcagc
gggacgatccgcgagatgctgaagctgaaggtcctcatcgacgtcccgccgacgaagatc
gtcagcgagttcgtcctcctccgccgcgccgacgcgcagaaggtcgccgacgccctgaac
aagctcctcgacagcgagaagacggcggccaacgccggggcgaacaacatcaacggcggg
ggcggcggcttccagcccggcggcaacccgcagcaggccttccaggcgatcgcccgggcg
atgagcgccgcccagagctccgccgcgtcgaacgtcgccgcgaacccgctcgcctcgtcg
aacacccgcttcgtccccgacgtgcggacgaaccggatcctcgtcgtcaccgagccctac
aacttcgcccccatgaaggccctcgtcgagggcttcgacctctccgccgacgtcatggac
ccctactcccgccccctccgctacatcaaggcggtcgatgtcctctggaccctcgcgaac
ctcatttccgagacgaaggacgacgcgagggacgccagcagctccgccagcagcgccgcg
aacctgaagagcccctcgggcaactcgaccgggacctcgaattcctccagctccgccagc
ggcctctcgcaggtcctgacgggagacccgacgaacatcccccccgccgctatcctcgtc
ggcaccacccgcctcatcgccgacaacagcaccaactcgatcatcgtcatcgggccgccc
gagagcgtgacgaaggtgaaggggatcctggacaagctcgacgtccgcccgaagcagatc
tacctcgccaccgtcatcgggaagatgaacctgaccaacgacgccgagatcagcgtgaac
atcctccagaactaccggaacgtctccggcaacaacggcctggccaccagctcgatgaac
gcggggacctcgacgctcagctcgttcccgacgccgagcacgctgaactccgccggggcc
ttctccttcttcaacggcctgaccctctacgggagcctcgggaacgcgatgaactattac
gtccaggccctcgagagcaccgggcgcttcaccatcctctcccgcccctccgtctacacg
gcgaacaacaagaaggcctacatttcctccggccagcaggtgccgatcccgcagagcacc
ctcagcaccctcgacacgacgagcaacaactcggtgacccagtcgtcgacgatcacctac
aagaacgccgcgctcctcttggaggtgatcccgctcatcaactcggagaaggaggtgacc
ctccagatcgccgtccagaacgacagcctcaacgggtcgagcacgatctccgggaacacc
atcccgatcatcgcctccgattcgctgaagacgacgatcaccgtcgtcaacaaggcgacc
atcgtcctcggcgggctgatccgcaaccaggagacgaagaaccggaccggcgtgccgttg
ttgaaggacatccccgtcctcggcgcgctcttccgcagcgacaccaacgcccgggaccgc
gacgagctcgtcgtcctcctccagccgaccgtcgtcgagaccccggaggaggaggccgcg
ctcgaaaaggccgaaagcagcagctccggcgtcggcccccgcgccaagcactacacctcc
gacccaaacaaggagatcccggagaaggcgaccgtgctggagtcgatcacgcactga

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