KEGG   Verrucomicrobium sp. GAS474: SAMN05444156_1792
Entry
SAMN05444156_1792 CDS       T09813                                 
Name
(GenBank) ATP-dependent DNA helicase DinG
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
veg  Verrucomicrobium sp. GAS474
Brite
KEGG Orthology (KO) [BR:veg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:veg03400]
    SAMN05444156_1792
Enzymes [BR:veg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     SAMN05444156_1792
DNA repair and recombination proteins [BR:veg03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SAMN05444156_1792
SSDB
Motif
Pfam: Helicase_C_2 DEAD ResIII Helicase_C DEAD_2 DDR_swiveling SecA_DEAD
Other DBs
NCBI-ProteinID: SDU07142
LinkDB
Position
I:complement(2126443..2128488)
AA seq 681 aa
MIAPRDGFSDLDIRVGRFFSPEGPLGEARNFELRPEQTRMAEAVARALIERRHLVVEAGT
GTGKSLAYLVPAIYHALEEGRQAILSTHTINLQEQLFLKDIPLVQKLIPQEFTAVLLKGR
QNYLCPRRLDRAMRNAEGLFATAQTEELKRLWEWHQKTEDGTLADLDPAPDMLVWSQVCS
EPHVCTPRTCGGENSRCFYQRLRLKAQTAQVLVVNHSLFFSLLAAEAESENTPSDEEGNG
YLFHNDFVVFDEAHTMENVAARHLGLTVSQSRLRFLLNRLYNTKTQKGLFQVLQRGEGAK
LVGETHHASEDFFAKVEGATPFNRGNEVRISKPGLVEDTLSYLLLRIHRTLIEALDDLEE
DGVGEGESSSGKSDLRLEVKDSAQRIASFKNGISEFLTQSREDHVYWVERSPKYKEIQLV
AAPTDVAPLLKRLVFRPGQTAIMTSATLAVARDLHFFQKRIGADEPSVESLKLDSPFDYA
KQMRVYIPRKMPEPNSGEDYERALARWIEHFVLETEGRAFVLFTSYKLLLAIADRMELFF
RNHDFTLLLQDGSQPRHKLLQRFRTGKKAVLFGTDSFWQGVDVPGDALGNVILTRLPFAV
PDHPLTQARLERIELEGGDPFRDYSLPEAILKFRQGVGRLIRTKQDTGIIVILDNRVLSK
TYGKAFLNMLPKCPVEILDQP
NT seq 2046 nt   +upstreamnt  +downstreamnt
atgattgcgccccgcgacggattctccgacctggacatccgcgtggggcgttttttttcg
cccgaggggcctctcggcgaggcccgtaatttcgagctccggccggagcagacccggatg
gccgaggccgtcgcccgggcgctgatcgagcgccgccacctcgtcgtcgaggccgggacc
gggaccgggaagagcctcgcctacctcgtccccgcgatctatcacgcgctggaggaaggg
cggcaggcgatcctctcgacccacacgatcaacctccaggagcagctcttcctgaaggac
atccccctcgtccagaaactgatcccgcaggagttcaccgccgtcctcctgaagggccgc
cagaactacctctgcccgcgccgcctcgaccgggcgatgcggaacgccgaggggctcttc
gccacggcgcagaccgaggagctgaagcgcctctgggaatggcaccagaagaccgaggac
gggaccctggccgacctcgatcccgcgcccgacatgctcgtctggtcccaggtctgctcg
gagccccacgtctgcacgccccgcacctgcggcggcgagaacagccggtgcttctaccag
cgcctccggctgaaggcgcagacggcgcaggtgctggtggtgaaccactcactctttttt
tccctcctcgccgccgaggccgagagcgagaacacgccctccgacgaggaggggaacggc
tacctcttccacaacgacttcgtcgtcttcgacgaggcccacacgatggagaacgtcgcc
gcccgccacctcggcctcaccgtctcccagtcccggctccgcttcctgctgaaccggctc
tacaacacgaagacccagaaggggctcttccaggtcctccagcgcggcgagggggcgaag
ctggtcggggagacccaccacgcctccgaggatttcttcgcgaaggtcgagggggcgacc
cccttcaaccgggggaacgaggtccgcatctcgaagcccggcctcgtcgaggacaccctc
tcctatctcctcctccgcatccaccggaccctcatcgaggccctcgacgacctggaggaa
gacggcgtcggggaaggagaatcatcgagtggaaaaagcgatctccgcctcgaggtgaag
gacagcgcccagcggatcgcctccttcaagaacgggatctcggagttcctcacccaatcg
cgcgaggaccacgtctactgggtcgagcggagcccgaagtacaaggagatccagctcgtc
gccgccccgaccgacgtcgccccgctgctgaaacgcctcgtcttccgccccggccagacg
gcgatcatgacgagcgccaccctcgccgtcgcccgcgacctccacttttttcaaaaacgg
atcggggccgacgagccctcggtcgagtcgctgaagctcgattcccccttcgattacgcg
aagcagatgcgggtctatatcccgcgcaagatgccggaaccgaactcgggcgaggactac
gagcgggcgctggcgcggtggatcgagcacttcgtcctcgagacggaaggtcgcgccttc
gtcctcttcaccagctacaagctcctcctggccatcgccgaccggatggagctcttcttc
cgcaaccacgacttcaccctcctcctccaggacgggagccagccccggcacaagctgctg
cagcgtttccgcacgggaaagaaggccgtcctcttcggcaccgacagcttctggcagggc
gtcgacgtcccgggcgacgcgctgggcaacgtcatcctcacccgcctccccttcgccgtc
cccgaccatccgctgacccaggcgcggctggaacggatcgagctggagggaggcgatccc
ttccgcgactactcgctccccgaggcgatcctgaaattccgccagggcgtcggccgattg
atccggaccaagcaggacaccggcatcatcgtcatcctcgacaaccgcgtcctctcgaag
acctacggaaaagcattcctgaacatgctccccaagtgccccgtcgagatcctagatcag
ccctaa

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