Verrucomicrobium sp. GAS474: SAMN05444156_1803
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Entry
SAMN05444156_1803 CDS
T09813
Name
(GenBank) DNA-binding protein HU-beta/integration host factor subunit alpha
KO
K04764
integration host factor subunit alpha
Organism
veg
Verrucomicrobium sp. GAS474
Brite
KEGG Orthology (KO) [BR:
veg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
veg03032
]
SAMN05444156_1803
03036 Chromosome and associated proteins [BR:
veg03036
]
SAMN05444156_1803
03400 DNA repair and recombination proteins [BR:
veg03400
]
SAMN05444156_1803
DNA replication proteins [BR:
veg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SAMN05444156_1803
Chromosome and associated proteins [BR:
veg03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
SAMN05444156_1803
DNA repair and recombination proteins [BR:
veg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
SAMN05444156_1803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HROB
HU-CCDC81_bac_2
PCuAC
Motif
Other DBs
NCBI-ProteinID:
SDU07328
UniProt:
A0A1H2FK53
LinkDB
All DBs
Position
I:complement(2149196..2149510)
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AA seq
104 aa
AA seq
DB search
MSNLTKRDLVVRISDETGLVQQDVMKVVQKLLDSFAESMAKGQTIELRNFGVFEVKMRKA
RVGRNPNKPEKDIVIPPRAVIKFKPGKELKAMLSKLTETLAAQP
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacctgaccaagagagacttagtagtgcgaatcagtgacgagaccggcctcgtc
cagcaggacgtgatgaaagtcgtccagaaactcctcgactccttcgcggagagcatggcc
aagggtcagaccatcgaactccgcaacttcggggtcttcgaggtgaagatgcggaaggcc
cgcgtcggccgcaacccgaacaagcccgagaaggacatcgtcatccccccccgcgccgtg
atcaagttcaagcccggcaaggaactgaaggcgatgctctccaagctcacggagaccctc
gccgcccagccgtag
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