Verrucomicrobium sp. GAS474: SAMN05444156_1819
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Entry
SAMN05444156_1819 CDS
T09813
Name
(GenBank) A/G-specific DNA-adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
veg
Verrucomicrobium sp. GAS474
Pathway
veg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
veg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAMN05444156_1819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
veg03400
]
SAMN05444156_1819
Enzymes [BR:
veg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
SAMN05444156_1819
DNA repair and recombination proteins [BR:
veg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SAMN05444156_1819
Prokaryotic type
SAMN05444156_1819
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
NUDIX_4
EndIII_4Fe-2S
RecR_HhH
HHH_5
AF_1859_N
Motif
Other DBs
NCBI-ProteinID:
SDU07612
LinkDB
All DBs
Position
I:2165586..2166644
Genome browser
AA seq
352 aa
AA seq
DB search
MDKRIKVSKSPGEARIEKNVLRAFHRALAAWFARAARDLPWRRTRDPYAIALSEFMLQQT
QVVTVLPYYHRWLRLFPDWKALAGAPTEAVLKTWEGLGYYQRARNFQKLAQAVAGLPELN
GELPRTVEGLRALPGIGPYTAGAIASLAFGGRAALIDGNVIRVFTRVFGIGEDVALKETQ
ARLWALAEGLLPEAEACAVHNSALMELGALICTPRNPGCLLCPLASVCVAKASGEPERFP
VKGRKLVERREEVVALIEEKGRYWCVPGPKKGRLVGFWHFPLFDAATMRGGETVAEFDYS
ITKYRVHMRGLRAAFASAGRREEGGGRWCSMAEMEALPMPSAHRKMRGFLGS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
ttggacaaaaggataaaagtatcaaaaagccccggcgaggcgagaattgaaaaaaacgtt
ctccgcgccttccaccgcgccctcgcggcctggttcgcccgggcggcccgggacctgccg
tggcggcggacgcgcgatccctatgccatcgccctctcggagttcatgctccagcagacg
caggtggtgacggtccttccctattaccatcgttggctccgactcttccccgactggaag
gcgctggccggggcgccgaccgaggcggttctgaagacgtgggagggcctcggctattac
cagcgggcgcggaatttccagaagctggcccaggcggtcgccgggttgccggagctgaac
ggggagctgccccggacggtcgaagggctccgcgccctgccggggatcgggccgtacacg
gcgggggcgatcgcgagtctcgccttcggggggcgggcggcgttgatcgacgggaatgtg
atccgggtcttcacccgggtcttcgggatcggcgaggacgtggcgctgaaggagacgcag
gcccggctctgggccttggccgaggggttgctgccggaggcggaggcgtgcgccgtccat
aactcggccctgatggagctgggggcgctgatctgcacgccccggaatcccggctgcctc
ctctgcccgctggcctcggtctgcgtcgccaaggcgtcgggggagccggagcggttcccg
gtgaaggggaggaagctcgtcgagcggcgggaggaggtggtggcgctgatcgaggaaaag
ggccggtattggtgcgtccccgggccgaagaaggggaggctggtcgggttctggcacttc
ccgctcttcgacgcggcgacgatgcggggaggggagacggtggccgagttcgattattcg
atcaccaagtatcgcgtccacatgaggggcttgcgggctgcgtttgcctccgcggggcgc
cgggaggagggagggggacgctggtgttccatggcggaaatggaggcattgccgatgccg
agcgcccaccggaaaatgaggggttttctcggttcttag
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