Verrucomicrobium sp. GAS474: SAMN05444156_1924
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Entry
SAMN05444156_1924 CDS
T09813
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
veg
Verrucomicrobium sp. GAS474
Pathway
veg00300
Lysine biosynthesis
veg00470
D-Amino acid metabolism
veg01100
Metabolic pathways
veg01110
Biosynthesis of secondary metabolites
veg01120
Microbial metabolism in diverse environments
veg01230
Biosynthesis of amino acids
Module
veg_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
veg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SAMN05444156_1924
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SAMN05444156_1924
Enzymes [BR:
veg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SAMN05444156_1924
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
SDU09476
UniProt:
A0A1H2FQA8
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All DBs
Position
I:2291306..2292583
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AA seq
425 aa
AA seq
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MHHFHYKGGKLYAEGVSLDALAEEYGTPLYVYSGHTVVEHYKALDHALKPLDHLICYAMK
ANSTLALLRLLARQGSGFDLVSGGELFRVQQAGGDPGKCTFAGVGKTRAEIEQALRAGIY
CFMVESEAELTFINEVATRLRKIAPVALRVNPNVDAKTHSKITTGTYENKFGIAFEEIPA
LYQRATALKHVTLRGVQMHIGSQITTAAPFAAAVKKMIPLVRELHRRHRLEFFDIGGGIG
IVYEDALASGQPDWWKKKGAPLTPAAYAESVVPQLRTLGLKVLVEPGRFMVGNAGVLLSE
VLYVKKTGKKNFVIIDAAMNDLIRPAFYDSYHEIVPLRAKTGKTIPSDVVGPICESGDTF
AKDRPLQPLKTGDRIAFLSAGAYGFTMASNYNTRPRAAEILVEGTKVKLARKREALVDLI
RGETA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacttccactacaagggtggcaagctctacgccgagggggtttccctcgacgcg
ctcgccgaagaatacggaactccgctctacgtctattccgggcacaccgtcgtggaacat
tacaaggccctcgaccacgccctgaagcccctcgaccacctcatctgctacgcgatgaag
gccaactcgaccctcgccctcctccgcctcctcgcgcggcagggctccggcttcgacctc
gtcagcggcggggaactcttccgcgtccagcaggccgggggcgatcccgggaagtgcacc
ttcgccggggtcggcaagacccgggccgagatcgagcaggcgctccgcgccgggatctac
tgcttcatggtcgagagcgaggccgagctgaccttcatcaacgaggtcgccacccgcctc
cggaagatcgcccccgtcgccctccgggtgaacccgaacgtcgacgcgaagacccactcg
aagatcaccaccgggacctacgagaacaagttcggcatcgccttcgaggagatccccgcc
ctctatcagcgcgccacggcgctgaagcacgtcaccctgcgcggcgtccagatgcacatc
ggttcccagatcaccacggcggcccccttcgccgccgcggtgaagaagatgatccccctc
gtccgcgagctccatcgccgccatcggctcgagttcttcgacatcggcggcggcatcggc
atcgtctacgaggacgccctcgccagcggccagcccgattggtggaagaagaagggcgcc
cccctcacgcccgccgcctacgcggaatcggtcgtgccgcagctccgcaccctcgggctg
aaggtcctcgtcgagccgggccgcttcatggtcggcaacgccggggtcctcctcagcgag
gtcctctacgtgaagaagaccgggaagaagaacttcgtcatcatcgacgccgcgatgaac
gacctcatccgccccgccttctacgactcctaccacgagatcgtccccctccgcgccaag
accggcaagaccatcccctccgacgtcgtcgggccgatctgcgagtcgggcgacaccttc
gcgaaggaccgccccctccagcccctgaagacgggcgaccgcatcgccttcctcagcgcc
ggggcgtacggcttcacgatggcctcgaactacaacacccgcccccgcgccgccgagatc
ctcgtcgaggggacgaaggtgaagctcgcccggaagcgggaagccctcgtcgacctcatc
cgcggggagacggcctag
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