Verrucomicrobium sp. GAS474: SAMN05444156_1925
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Entry
SAMN05444156_1925 CDS
T09813
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
veg
Verrucomicrobium sp. GAS474
Pathway
veg00300
Lysine biosynthesis
veg00470
D-Amino acid metabolism
veg01100
Metabolic pathways
veg01110
Biosynthesis of secondary metabolites
veg01120
Microbial metabolism in diverse environments
veg01230
Biosynthesis of amino acids
Module
veg_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
veg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SAMN05444156_1925
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SAMN05444156_1925
Enzymes [BR:
veg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SAMN05444156_1925
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GFIT
Motif
Pfam:
DAP_epimerase
Draxin
Motif
Other DBs
NCBI-ProteinID:
SDU09495
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Position
I:2292620..2293453
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AA seq
277 aa
AA seq
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MPMKLSFTKMTGAGNDFVMLDNRACTTFLSASQIAFLCDRHFGVGGDGLLLLEPPANPEA
ADFRMRYYNADGSEADMCGNGARCFAQFARHLGATKSLGDSIKFETLAGIISATYVGNEV
AIVLTAPHSLERAKAVPTRSAGEITVGFINTGVPHAVQFVADVEKIDIRTLGAEVRYNEV
FKPKGTNANFAQITGPDSIRVRTYERGVEDETLACGTGVSAAAVLAHLVHGVAKPVRVLV
QGKSILTVDFREEGSEISNIVLQGPALVVFTGEIECP
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgaagctttccttcacgaagatgaccggagccggaaacgacttcgtcatgctc
gacaaccgcgcctgcaccacgttcctttcggcctcgcagatcgccttcctctgcgaccgc
cacttcggcgtcggcggggacggcctcctgctgctggagccccccgccaaccccgaggcc
gccgacttccgcatgcgttactacaacgccgacgggagcgaggccgacatgtgcggcaac
ggcgcgcgctgcttcgcccagttcgcccgccacctcggcgcgacgaagtccctcggcgat
tcgatcaagttcgagaccctcgccgggatcatctcggccacctacgtcgggaacgaggtc
gccatcgtcctcaccgcgccccacagcctggaacgggccaaggccgtccccacccggagc
gccggggagatcaccgtcggcttcatcaacactggcgttccccacgccgttcagttcgtc
gccgatgtcgagaagatcgacatccgcaccctcggcgccgaggtccgctacaacgaggtc
ttcaagccgaaggggaccaacgccaacttcgcccagatcaccggccccgactcgatccgc
gtccgcacctacgagcgcggcgtcgaggacgagaccctcgcctgcggcaccggcgtctcg
gccgccgccgttctcgcccacctcgtccacggtgtggcgaagcccgtccgcgtcctcgtc
caggggaagtcgatcctcacggtcgacttcagggaagagggttccgagatctcgaacatc
gtccttcaaggccccgccctcgtcgtcttcaccggagaaatcgaatgtccctaa
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