KEGG   Verrucomicrobium sp. GAS474: SAMN05444156_1925
Entry
SAMN05444156_1925 CDS       T09813                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
veg  Verrucomicrobium sp. GAS474
Pathway
veg00300  Lysine biosynthesis
veg00470  D-Amino acid metabolism
veg01100  Metabolic pathways
veg01110  Biosynthesis of secondary metabolites
veg01120  Microbial metabolism in diverse environments
veg01230  Biosynthesis of amino acids
Module
veg_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:veg00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    SAMN05444156_1925
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SAMN05444156_1925
Enzymes [BR:veg01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     SAMN05444156_1925
SSDB
Motif
Pfam: DAP_epimerase Draxin
Other DBs
NCBI-ProteinID: SDU09495
LinkDB
Position
I:2292620..2293453
AA seq 277 aa
MPMKLSFTKMTGAGNDFVMLDNRACTTFLSASQIAFLCDRHFGVGGDGLLLLEPPANPEA
ADFRMRYYNADGSEADMCGNGARCFAQFARHLGATKSLGDSIKFETLAGIISATYVGNEV
AIVLTAPHSLERAKAVPTRSAGEITVGFINTGVPHAVQFVADVEKIDIRTLGAEVRYNEV
FKPKGTNANFAQITGPDSIRVRTYERGVEDETLACGTGVSAAAVLAHLVHGVAKPVRVLV
QGKSILTVDFREEGSEISNIVLQGPALVVFTGEIECP
NT seq 834 nt   +upstreamnt  +downstreamnt
atgcccatgaagctttccttcacgaagatgaccggagccggaaacgacttcgtcatgctc
gacaaccgcgcctgcaccacgttcctttcggcctcgcagatcgccttcctctgcgaccgc
cacttcggcgtcggcggggacggcctcctgctgctggagccccccgccaaccccgaggcc
gccgacttccgcatgcgttactacaacgccgacgggagcgaggccgacatgtgcggcaac
ggcgcgcgctgcttcgcccagttcgcccgccacctcggcgcgacgaagtccctcggcgat
tcgatcaagttcgagaccctcgccgggatcatctcggccacctacgtcgggaacgaggtc
gccatcgtcctcaccgcgccccacagcctggaacgggccaaggccgtccccacccggagc
gccggggagatcaccgtcggcttcatcaacactggcgttccccacgccgttcagttcgtc
gccgatgtcgagaagatcgacatccgcaccctcggcgccgaggtccgctacaacgaggtc
ttcaagccgaaggggaccaacgccaacttcgcccagatcaccggccccgactcgatccgc
gtccgcacctacgagcgcggcgtcgaggacgagaccctcgcctgcggcaccggcgtctcg
gccgccgccgttctcgcccacctcgtccacggtgtggcgaagcccgtccgcgtcctcgtc
caggggaagtcgatcctcacggtcgacttcagggaagagggttccgagatctcgaacatc
gtccttcaaggccccgccctcgtcgtcttcaccggagaaatcgaatgtccctaa

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