Verrucomicrobium sp. GAS474: SAMN05444156_1940
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Entry
SAMN05444156_1940 CDS
T09813
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
veg
Verrucomicrobium sp. GAS474
Pathway
veg04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
veg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
SAMN05444156_1940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
veg03016
]
SAMN05444156_1940
Enzymes [BR:
veg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
SAMN05444156_1940
Transfer RNA biogenesis [BR:
veg03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
SAMN05444156_1940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
NAD_synthase
ThiI
Arginosuc_synth
QueC
DUF7411
Asn_synthase
Motif
Other DBs
NCBI-ProteinID:
SDU09748
UniProt:
A0A1H2FS08
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All DBs
Position
I:2305515..2306687
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AA seq
390 aa
AA seq
DB search
MSETNTPASKGRVLLGMSGGVDSSVAAYLLKEEGWEVIGVTMKVWPQDCMSRAEDKCCGP
QAVADARSVAHALGIPHYVVDEADEFEKVVIDYFGSEYRQGRTPNPCVMCNEKLKFGRLQ
DKALGLGATHVATGHYAQIVHENGRSRLFRAKDRKKDQSYFLFSLRDGQLGRSVSPLGHL
EKPEVRAIAKKLGLKTYDKEESQEICFVPGNDYAAFLKGHFGEETFHPGGIYLRDGTRIG
EHEGIELYTVGQRKGLPGGQGKPLYVLDIDPKGQRVIVGGYEELERPECFIDNTNWLTAD
GKLTVPTEIEVKIRYNWPAVRARVEPIEGHPHRARIVFAEPQRAVSPGQAAVCYIRSREG
SDDFDEVLGGGWIERSEIVVEEKTVAAAER
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagactaacactcccgcgagcaagggccgcgtcctcctcggcatgagcggcggc
gtcgactcgagcgtcgccgcctacctcctgaaggaggagggctgggaagtcatcggcgtc
acgatgaaggtctggccgcaggattgcatgtcccgcgccgaggacaagtgctgcggcccc
caggccgtcgccgacgcccgctccgtcgcccacgccctcggcatcccccattacgtcgtc
gacgaggccgatgagttcgagaaggtcgtcatcgactacttcggcagcgagtaccgccag
ggccggacgccgaacccgtgcgtcatgtgcaacgagaagctcaagttcggccgcctccag
gacaaggccctcggcctcggcgccacccacgtcgccaccggccattacgcccagatcgtt
cacgagaatggccgctcccgccttttccgcgccaaggaccggaagaaagaccaatcgtac
ttcctcttcagcctccgcgacggccagctgggccgctccgtctcccccctcggccacctg
gaaaagcccgaggtccgcgccatcgcgaagaaactcggcctgaagacctacgacaaggaa
gagagccaggaaatctgcttcgtccccggcaacgactacgccgccttcctcaagggccac
ttcggcgaggagaccttccaccccggcggcatctacctccgcgacggcacccgcatcggc
gagcacgaggggatcgaactctacaccgtcggccagcggaaggggctccccggcggccag
gggaaacccctctacgtcctcgacatcgatccgaagggccagcgcgtcatcgtcggcggc
tacgaggaactggagcgccccgagtgcttcatcgacaacaccaattggctgaccgccgac
ggcaagctcacggttccgaccgagatcgaggtgaagatccgttacaactggcccgccgtc
cgcgcgagggtcgagcccatcgaagggcatccccaccgcgcccgcatcgttttcgccgaa
ccccagcgggccgtctcgccggggcaggccgccgtctgctacatccgcagccgggagggt
tcggacgacttcgacgaagttctcgggggcggctggatcgagcggagcgagatcgtcgtc
gaggaaaagaccgttgccgctgcggagcgataa
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