Verrucomicrobium sp. GAS474: SAMN05444156_1964
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Entry
SAMN05444156_1964 CDS
T09813
Name
(GenBank) Beta-barrel assembly machine subunit BamA
KO
K07277
outer membrane protein insertion porin family
Organism
veg
Verrucomicrobium sp. GAS474
Brite
KEGG Orthology (KO) [BR:
veg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
veg03029
]
SAMN05444156_1964
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
veg02000
]
SAMN05444156_1964
Mitochondrial biogenesis [BR:
veg03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
SAMN05444156_1964
Transporters [BR:
veg02000
]
Other transporters
Pores ion channels [TC:
1
]
SAMN05444156_1964
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
POTRA
Omp85
POTRA_2
POTRA_1
DUF2845
RRM_PARP14_2
Motif
Other DBs
NCBI-ProteinID:
SDU10192
UniProt:
A0A1H2FS92
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All DBs
Position
I:2328214..2330565
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AA seq
783 aa
AA seq
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MPAPAAQQQELNVPQVSDSEKKTVDSTGALKQKEYGPTVKEVEVVYFNGQPSVNKTVILS
NMRTTVGQPYSPAAVEEDVKNLYATGLFVNLRITDEPMGDGVKVVIVVQPKPLIKDVVFI
GNSKVKQSRLRKEAKTKVGEPLSEHQVAEDQQKIREYYLSKGFNNIQVTYKIDVNEEANR
AVVTFTVNEGDKSFIREVDFKGNTAFTEKELRKIFKKTKKKNWLSFINKSGLYKDDEFKE
DLDKLKEFYQNHGYIDFEVKDTQVTYPESGDIHIAITIFEGIQYKVGKLELDGETVYDEK
TVRKALTMSEGGVFSPKGLDDNEKAIRDLYGKKGYIDTEIKVERTANVESAQIDLNYHLA
EGAQTYVDKIVIQGNTTTKDKVIRREIAVAPGEVYDSVRVDASKKRLENIGYFEKVDITP
EDTSVPNRRNMVINVSEKKTGSVTFGIGFSSVDSLLGFVELQQGNFDIANFPNFTGGGQK
FRSRVQYGLTRKDLTMSVVEPWFLDKPLSLGFDIFAHQLTNNYQTNLWGTDNYGASVYLA
KQLTPFWTASIKYQLQQTSLYDFDASVPVYLPGLYQERGTRSESGVTGTLTYDTRDSVFL
TRHGEKVSFSAMGAGGPLWGQTNIYSMNVTATKWFLLPYDLIFSVNGGTGVVNRYGGSDR
VPIYERLFLGGSRSVRGFDNQQVGPKYDTGEPAGGLTDGYANFELTFPIIDRVRGAVFYD
AGFVDAKYGEFTHIGGDYNSAVGIGLRLNLPIGPLRFDYGVPLKHDQWNGGSGKFAFDVG
YQF
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcccccgccgcgcagcagcaggaactcaacgttccccaggtctccgattccgaa
aagaaaaccgtcgattcgaccggcgcgctgaagcagaaggaatacggccccaccgtcaag
gaagtcgaagtcgtctacttcaacggccagccctcggtcaacaagaccgtcatcctctcc
aacatgcggaccacggtcggccagccctactcgcccgccgccgtcgaggaagacgtcaag
aacctctacgccaccggcctcttcgtcaacctccgcatcaccgacgagcccatgggtgac
ggcgtcaaggtcgtcatcgtcgtccagccgaagcccctcatcaaggacgtcgtcttcatc
ggcaactccaaggtgaagcagagccgcctccgcaaggaagcgaagaccaaggtcggcgag
cccctcagcgagcaccaggtcgccgaggaccagcagaagatccgcgaatactacctttcc
aagggcttcaataacatccaggtcacctacaagatcgacgtgaacgaggaggcgaaccgc
gccgtcgtcaccttcaccgtcaacgaaggggacaagtcgttcatccgcgaggtcgacttc
aaggggaacaccgccttcactgagaaggaactccgcaagatcttcaagaagaccaagaag
aagaactggctctccttcatcaacaagtcgggcctctacaaggacgacgagttcaaggaa
gacctcgacaagctcaaggaattctaccagaaccacggctacatcgacttcgaggtcaag
gacacccaggtgacctaccccgagtcgggcgacatccacatcgccatcacgatcttcgag
ggcatccaatacaaggtcggcaagctcgagctcgacggcgagaccgtctacgacgagaag
accgtccgcaaggcgctcaccatgagcgagggcggcgtcttctccccgaagggcctcgac
gacaacgaaaaggcgatccgcgacctctacggcaagaagggctacatcgacaccgagatc
aaggtcgagcgcaccgccaatgtcgagagcgcccagatcgacctcaattaccacctcgcc
gaaggggcccagacctacgtcgacaagatcgtcatccagggcaacacgacgacgaaggac
aaggtcatccgccgcgaaatcgccgtcgccccgggcgaggtctacgacagcgtccgcgtc
gacgccagcaagaagcgcctcgagaacatcggctacttcgagaaggtcgacatcaccccc
gaggacacctcggtcccgaatcgccggaacatggtcatcaatgtctccgaaaagaagacc
ggcagcgtcaccttcggcatcggcttcagctccgtcgacagcctcctcggcttcgtcgag
ctgcagcagggcaacttcgacatcgccaacttcccgaacttcaccggcggcggccagaag
ttccggagccgcgtccagtatggcttgacccgcaaggatctcaccatgagcgtcgtcgag
ccctggttcctcgacaagccgctctccctcggcttcgacatcttcgcccaccagctgacg
aacaactaccagaccaacctctggggcaccgacaactacggcgcctccgtctacctcgcg
aagcagctgacccccttctggacggcctcgatcaagtatcagctccagcagaccagcctt
tacgacttcgacgcctccgtccccgtctacctgcccggcctctaccaggagcgcggcacc
cggtcggagagcggcgtcaccggcaccctcacctacgacacccgcgacagcgtcttcctg
acccgccacggtgagaaggtctccttctccgccatgggcgcgggcggcccgctctggggc
cagacgaacatctattcgatgaacgtcacggcgacgaagtggttcctcctcccctacgac
ctcatcttctcggtgaacggcgggacgggcgtcgtgaaccgctacggcggctccgatcgc
gtgccgatctacgagcggctcttcctcggcggttcccgcagcgtccgcggcttcgacaac
cagcaggtcggcccgaagtacgacacgggcgagcccgcgggcggtctgaccgacggctac
gccaacttcgagttgaccttccccatcatcgaccgcgtccgcggcgccgtcttctacgac
gccgggttcgtcgacgcgaaatacggggagttcacccacatcggcggcgactacaattcc
gccgtcggcatcggcctccgcctcaatctccccatcggtccccttcgcttcgactacggt
gtccctctgaagcatgaccagtggaatggcggcagcggcaagtttgcctttgacgtcggc
taccagttctaa
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