Verrucomicrobium sp. GAS474: SAMN05444156_2101
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Entry
SAMN05444156_2101 CDS
T09813
Name
(GenBank) DNA-binding transcriptional regulator, LacI/PurR family
Organism
veg
Verrucomicrobium sp. GAS474
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
GntR
Peripla_BP_1
Peripla_BP_4
HTH_41
HTH_Crp_2
HTH_11
Motif
Other DBs
NCBI-ProteinID:
SDU12459
UniProt:
A0A1H2FYR4
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Position
I:2496278..2497435
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AA seq
385 aa
AA seq
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MGRVAGRVSGECGSIGRAPKELNMSVPSRKTRSSKPDAIYAVLRGRIDSGHWGVGERLPT
EIELASEFQCSRTSVSKALSLLSLAGLVGRRTRDGTRVLPPSAGKMLDALAFIYPNERHE
GVWRTVCGFQEAAFGAQRRTLMLPTGTDFRKGAEIIGRLGEFDVKGAVLLPTFQAERDHT
YYVQMLHACRLPIVLAEINLPGVLRPAAVPDGFHAGYEVTRHLLKRGLRKIGFLANFSWA
PLTRDKYLGYRKAMEEAGLDGNSARVRQEAEMTPRFDDPLREPTEVAERYLAEQSDVKAV
VCANDYLALGLIAAAKRRKIRIPQAMKVVGIDDFRAAAPAGLTTYRIPYEEIGRQSFALL
ERALAGHPEPSEIQVRGELVVRESA
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgggcagggtggcggggcgcgtgtcgggcgaatgcggttcgatagggcgcgcccccaag
gaattgaacatgtccgtcccctccaggaaaacccggtcgagcaagcccgatgcgatctat
gccgtgcttcgggggcggatcgactcggggcattggggcgtcggggagcgcctgccgacc
gagatcgagctcgcctccgaattccagtgcagccggacgtcggtcagcaaggccctctcg
cttttgtcccttgcggggctggtcggccgccggacgcgcgacgggacccgcgtcctgccc
ccctcggcggggaagatgctcgacgccctcgccttcatctatcccaacgaacggcacgaa
ggagtctggcgcacggtctgcgggttccaggaggccgccttcggggcccagcggcggacg
ttgatgctgccgacggggaccgacttccggaagggggccgagatcatcggccgcctgggg
gaattcgacgtgaagggggcggtgctgctgcccacgttccaggcggaacgggaccatacc
tattacgtccagatgctccacgcgtgccgcctccccatcgtcctggcggagatcaacctg
cccggcgtcctgcggcccgccgcggtgcccgatggcttccatgccgggtacgaggtgacg
cgccatctcctcaagcggggactgaggaagatcggtttcctggcgaatttctcgtgggcg
cccctcacgcgcgacaagtatctgggctaccggaaggcgatggaggaggccggcctcgac
gggaactcggcccgggtccgccaggaggccgaaatgacgccccggttcgacgatccgctg
cgggagccgaccgaagtcgccgaacggtacctcgcggagcaatcggacgtgaaggcggtc
gtctgcgcgaatgactatctggccctcggcctgatcgccgccgcgaagcgaaggaagatc
cggattccccaggcgatgaaagtcgtcgggatcgacgacttccgggccgccgccccggcg
gggctcacgacctaccggattccctacgaggaaatcggccgccaatcgttcgcgctgctg
gagcgggcgcttgcgggccaccccgaaccgagtgaaatccaggtgcgcggcgaactcgtc
gtccgcgagagcgcctga
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