Verrucomicrobium sp. GAS474: SAMN05444156_2277
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Entry
SAMN05444156_2277 CDS
T09813
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
veg
Verrucomicrobium sp. GAS474
Pathway
veg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
veg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SAMN05444156_2277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
veg03021
]
SAMN05444156_2277
03400 DNA repair and recombination proteins [BR:
veg03400
]
SAMN05444156_2277
Enzymes [BR:
veg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SAMN05444156_2277
Transcription machinery [BR:
veg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SAMN05444156_2277
DNA repair and recombination proteins [BR:
veg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SAMN05444156_2277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
SDU15316
UniProt:
A0A1H2G6K4
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All DBs
Position
I:2678652..2678906
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AA seq
84 aa
AA seq
DB search
MSNAAFVQEALNIVGTPEVLVNVISRRVRQLGQGARPLVEVHPRWTLMEVALREIADHKL
TFELIDPKVAQAESDEAAAAAAAA
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgccgcctttgtccaggaagcccttaacatcgttggaacccccgaggtcctc
gttaacgtcatttcccggcgcgtccgccagctcgggcagggtgcccgcccgctcgtcgag
gtccatccccgctggacgttgatggaagtcgccctccgcgagatcgccgaccacaagctg
actttcgagctgatcgacccgaaggtcgcccaggccgaatcggacgaggccgccgccgct
gccgccgccgcctaa
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