Verrucomicrobium sp. GAS474: SAMN05444156_2366
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Entry
SAMN05444156_2366 CDS
T09813
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
veg
Verrucomicrobium sp. GAS474
Pathway
veg03030
DNA replication
veg03430
Mismatch repair
veg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
veg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAMN05444156_2366
03430 Mismatch repair
SAMN05444156_2366
03440 Homologous recombination
SAMN05444156_2366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
veg03032
]
SAMN05444156_2366
03400 DNA repair and recombination proteins [BR:
veg03400
]
SAMN05444156_2366
Enzymes [BR:
veg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAMN05444156_2366
DNA replication proteins [BR:
veg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAMN05444156_2366
DNA repair and recombination proteins [BR:
veg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAMN05444156_2366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Reovirus_M2
Motif
Other DBs
NCBI-ProteinID:
SDU16709
UniProt:
A0A1H2GB36
LinkDB
All DBs
Position
I:2769675..2770742
Genome browser
AA seq
355 aa
AA seq
DB search
MKPVTLYAGSDHYEVQRAAIALAESMAPEDPLNYEVLNAQADTVNDALAQIAALREAVLT
LPFMGGGKVVWWKNVTFLADTPQGRSEAVLEALEKLVPVLQGADETVKVIISALGIDRRR
AFFKALGKFAEVRAFDLPDARKIDPEDAIAIIESRLFERRLKAEPGVAERIFAAFGADKR
SIEEAVEKLDLHAGEGRTVTAAEARVLVGGNREVAIWDFCDAVLAGRSRDALEELEQLFR
QGESEIGILILLSQQIRLAALGGVLAENKLLRLVPKGNFMNVQLSPEAEAYLPRKKSGET
VNTWQLGQVCQKSRKRPASFWVKAIDLLHRVHRQIVTGQADKQRAIELAVLELTA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctgtcaccctttacgccggatcggaccattacgaggtccagcgcgccgcgatc
gccctcgccgagagcatggcccccgaggacccgctcaattacgaggtgttgaacgcccag
gccgatacggtgaacgacgccctcgcccagatcgccgccctccgcgaggcggtgctgacg
ctccccttcatggggggcggcaaggtcgtctggtggaagaacgtcaccttcctcgccgac
acgccgcaggggcggagcgaggcggtcctggaggcgttggagaagctcgtccccgtcctc
cagggggccgacgagacggtgaaggtgatcatcagcgccctcggcatcgaccggcggcgg
gcgttcttcaaggccctcggcaagttcgccgaggttcgcgccttcgacctgcccgatgcc
cggaagatcgaccccgaggacgccatcgcgatcatcgagtcgcgcctcttcgagcgccgc
ctgaaggccgagccgggcgtcgccgagcggatcttcgccgccttcggggccgacaagcgg
agcatcgaggaggcggtcgagaagctcgacctccacgcgggggaggggcggacggtgacg
gcggccgaggcccgcgtcctcgtcggcggcaatcgcgaagtcgcgatctgggatttctgc
gacgccgtcctcgcgggccgttcccgcgacgcgctggaggagctggagcagctcttccgg
cagggcgaatcggagatcggcatcctgatcctcctctcccagcagatccgcctcgccgcc
ctcgggggcgtcctggcggagaacaagctcctccgcctcgtcccgaaggggaacttcatg
aacgtccagctctcccccgaggccgaggcctatctcccgcgcaagaaatcgggcgagacg
gtgaacacctggcagctgggccaggtctgccagaagtcgaggaaacgccccgcctccttc
tgggtgaaggccatcgacctcctccaccgcgtccaccgccagattgtgacgggccaggcc
gacaagcagcgggcgatcgagctggcggtactggaattgacggcgtga
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