Verrucomicrobium sp. GAS474: SAMN05444156_2542
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Entry
SAMN05444156_2542 CDS
T09813
Name
(GenBank) molecular chaperone DnaK
KO
K04043
molecular chaperone DnaK
Organism
veg
Verrucomicrobium sp. GAS474
Pathway
veg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
veg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMN05444156_2542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
veg03019
]
SAMN05444156_2542
03110 Chaperones and folding catalysts [BR:
veg03110
]
SAMN05444156_2542
03029 Mitochondrial biogenesis [BR:
veg03029
]
SAMN05444156_2542
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
veg04147
]
SAMN05444156_2542
Messenger RNA biogenesis [BR:
veg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SAMN05444156_2542
Chaperones and folding catalysts [BR:
veg03110
]
Heat shock proteins
HSP70 / DNAK
SAMN05444156_2542
Mitochondrial biogenesis [BR:
veg03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
SAMN05444156_2542
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
SAMN05444156_2542
Exosome [BR:
veg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SAMN05444156_2542
Exosomal proteins of breast cancer cells
SAMN05444156_2542
Exosomal proteins of colorectal cancer cells
SAMN05444156_2542
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Motif
Other DBs
NCBI-ProteinID:
SDU19681
LinkDB
All DBs
Position
I:complement(2973652..2975598)
Genome browser
AA seq
648 aa
AA seq
DB search
MAHILGIDLGTTNSCMAIMEGGQPVVLENSEGARTTPSIVAFTKSGERLVGQAAKRQGVT
NAKNTIFSAKRFMGRKFAEVKEELKRVPYKVVEAKNGDCAIEIEVAGEKKTYSPQEISAF
ILMKLKADAEAKLGETITQAVITVPAYFNDSQRQATKDAGKIAGLEVQRIINEPTAASLA
YGLDKKKDEKIAVYDLGGGTFDISVLEIGDGVFEVKATNGDTHLGGDDWDNAVMDWLLAE
FKTESGIDLKGQPDAVQRLKEESEKAKIALSSAQDYEINLPFITADASGPKHIQKKITRA
KLEQLTDALAERTLKPVTACLNDSKLNADQIDELVLVGGMTRMPKVVETARKLIKKEPHK
GVNPDEVVAIGAAIQGGVLKGDVKDVLLLDVTPLSLAIETAGGIATAMIPRNTTVPTRKS
QIFSTYSDNQPGVEVKVLQGERQMAKDNKQLGVFHLDGIPPAPRGVPQIEVTFDIDANGI
LHVSAKDLGTSKEQKISITGSSGLSKEEVEKMTKEAEQFAEADKKAKEAIELRNTADNAA
YQAEKLLKDQADKIDEAKKTEVEAAVAKVREELKGTNDETLKAAVDDLNEKVQAISIEMY
KAAAAKADSGSPEGEVHGHDTGETPKEKPADVIDADFEVIDKDKEKKK
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggcacacattttaggcatcgaccttggtaccaccaactcctgcatggcaatcatggaa
gggggacagcccgtggttctcgaaaactccgaaggggcacgcaccacgccctcgatcgtg
gcattcacgaagtcgggcgaacgtctcgtcggccaggccgcgaagcgccagggcgtcacg
aacgcgaagaacaccatcttctccgcgaagcggttcatggggcgcaagttcgccgaagtg
aaggaagagctgaagcgcgttccctacaaggtcgtcgaggcgaagaacggcgattgcgcc
atcgagatcgaggtcgccggcgaaaagaagacctactctccccaggaaatttccgccttc
atcctcatgaagctgaaggccgacgccgaagccaagctcggcgagacgatcacccaggcc
gtcatcacggtccccgcctacttcaacgacagccagcgccaggcgaccaaggacgcgggc
aagatcgcgggcctcgaagtccagcgcatcatcaacgagccgacggccgcctccctcgcc
tacggcctcgacaagaagaaggacgagaagatcgccgtctatgacctcggcggcggcacg
ttcgacatctcggtcctcgagatcggcgacggcgtcttcgaggtgaaggcgaccaacggc
gacacccacctcggcggcgatgactgggacaacgcggtcatggactggctcctcgccgag
ttcaagaccgagtccggcatcgacctcaagggccagcccgacgccgtccagcgcctgaag
gaagagtcggaaaaggcgaagatcgccctctcctccgcccaggactacgagatcaatctc
cccttcatcacggccgacgcctccggcccgaagcacatccagaagaagatcacccgcgcg
aagctcgagcagctcaccgacgccctcgcggagcggacgctgaagccggtcacggcctgc
ctcaacgactcgaagctcaacgccgaccagatcgacgagctcgtcctcgtcggcggcatg
acccgcatgccgaaggtcgtcgagacggcccgcaagctcatcaagaaggaaccccacaag
ggcgtgaaccccgacgaagtcgtcgccatcggcgcggcgatccagggcggcgtcctcaag
ggcgacgtgaaggacgtcctcctcctcgacgtcaccccgctctccctcgccatcgagacg
gcgggcggcatcgccaccgcgatgattccccggaacaccaccgtcccgacccggaagtcc
cagatcttcagcacctactcggacaaccagccgggcgtcgaggtgaaggtcctccagggc
gagcgccagatggccaaggacaacaagcagctcggcgtcttccacctcgacggcatcccg
ccggcgccccgcggcgtcccccagatcgaagtgaccttcgacatcgacgcgaacggcatc
ctccacgtctcggccaaggacctcggcacgagcaaggagcagaagatctccatcaccggt
tcgagcggcctctccaaggaagaggtcgagaagatgacgaaggaagccgagcagttcgcc
gaggccgataaaaaggccaaggaggcgatcgagctccgcaacaccgccgacaacgccgcc
taccaggccgagaagctcctcaaggatcaggccgacaagatcgacgaggcgaagaagacc
gaagtcgaggccgccgtcgccaaggtccgcgaggaactgaaggggacgaacgacgagacc
ctgaaggccgccgtcgacgacctcaacgagaaggtccaggccatctcgatcgagatgtac
aaggctgccgcggcgaaggccgattcgggctcgcccgaaggcgaagtccacggccacgac
acgggcgaaaccccgaaggaaaagccggccgacgtgatcgacgccgacttcgaggtcatc
gacaaggacaaggaaaagaagaagtaa
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