Verrucomicrobium sp. GAS474: SAMN05444156_2649
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Entry
SAMN05444156_2649 CDS
T09813
Name
(GenBank) 23S rRNA pseudouridine2457 synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
veg
Verrucomicrobium sp. GAS474
Brite
KEGG Orthology (KO) [BR:
veg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
veg03009
]
SAMN05444156_2649
Enzymes [BR:
veg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
SAMN05444156_2649
Ribosome biogenesis [BR:
veg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SAMN05444156_2649
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
SDU21477
UniProt:
A0A1H2GPI1
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All DBs
Position
I:complement(3109965..3110537)
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AA seq
190 aa
AA seq
DB search
MLIAFHKPYGVLSQFTPDGSPNRTLAEFGFPKRVYPLGRLDADSEGLLLLSDEAGLNTRL
LDPEKGEGHPRTYWAQVERVPGAEALAKLAKGGIEIQGYRARPCRAWLLDPQPEVVPRDP
PIRFRKNVPDSWIGLELIEGKNRQVRRMTAAVGHPTLRLLRVAVGTFPLGTLAAGKWVEV
SAGDRKRLGL
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgttgatcgcattccacaaaccttacggcgtcctcagccagttcacccccgacggctcg
ccgaaccggaccctggccgaattcggctttcccaagcgggtctatccgctcggccgcctc
gacgccgacagcgaggggctcctcctcctttccgacgaggcggggctcaacacccggctc
ctcgaccccgagaagggggagggccatccccgcacgtactgggcgcaggtggagcgggtg
ccgggggcggaggcgctggcgaagctggccaagggagggatcgaaatccagggctatcgg
gcccgcccctgccgcgcctggctcctcgatccccagcccgaagtcgtcccccgcgatccc
ccgatccgcttccgcaagaacgtccccgattcctggatcggcctcgagttgatcgaggga
aagaaccggcaggtccgccggatgacggcggcggtaggccatccgacgctgcggctcctg
cgggtcgcggtcgggacgttcccgctcgggacgctggcggcggggaagtgggtcgaggtt
tcggctggcgatcggaagcggttgggtctttga
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