Verrucomicrobium sp. GAS474: SAMN05444156_2783
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Entry
SAMN05444156_2783 CDS
T09813
Name
(GenBank) geranylgeranyl diphosphate synthase, type II
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
veg
Verrucomicrobium sp. GAS474
Pathway
veg00900
Terpenoid backbone biosynthesis
veg01100
Metabolic pathways
veg01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
veg00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SAMN05444156_2783
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
veg01006
]
SAMN05444156_2783
Enzymes [BR:
veg01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
SAMN05444156_2783
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
SAMN05444156_2783
2.5.1.29 geranylgeranyl diphosphate synthase
SAMN05444156_2783
Prenyltransferases [BR:
veg01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
SAMN05444156_2783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
3HCDH_RFF
Motif
Other DBs
NCBI-ProteinID:
SDU23748
UniProt:
A0A1H2GWS1
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All DBs
Position
I:complement(3254899..3255780)
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AA seq
293 aa
AA seq
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MNLAPYWKARQGEVEASLNALLPKEKTRPATIHKAMRYSIFAGGKRLRPILTLAASEAIS
GKYKDALPLACAVECIHTYSLIHDDLPCMDNDDLRRGKPTSHKVFGEGIAVLAGDALLTI
AFEMTAKAKASKRYNHGALVLELAEVSGSQALIGGQVADTEGEGKKLSPADLRYIHENKT
AALITGSLRLGAMSANATEKQLAAITEFGQALGLAFQVIDDILDCTQTSEQLGKSAGKDI
AAQKATYPSILGMDKAVKEAARLTKKADDALKIFGVKGETLRAIAGYMLERKN
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgccccctattggaaggcccgtcagggcgaagtcgaagcctccctcaacgcc
ctccttccgaaggagaagacccgtcccgcgacgatccacaaggcgatgcgctacagcatc
ttcgccgggggcaagcggctccgcccgatcctgaccctcgccgcctcggaggcgatctcc
ggcaagtacaaggacgccctcccgctcgcctgcgccgtcgagtgcatccacacctattcc
ctgatccatgacgatctcccctgcatggacaacgacgatctccgccggggcaagccgacc
tcgcacaaggtcttcggcgaagggatcgccgtcctcgcgggcgacgccctcctgaccatc
gccttcgagatgaccgccaaggccaaggcatcgaagcgctacaaccacggcgccctcgtc
ctcgagctggccgaggtctccggcagccaggccctcatcggcggccaggtggccgacacc
gagggcgaggggaagaagctctcccccgccgacctccgctacatccacgagaacaagacg
gcggccctcatcaccggctccctccgcctcggcgcgatgagcgcgaacgcgacggaaaag
cagctcgccgccatcaccgaattcggccaggccctcggcctcgccttccaggtcatcgac
gacatcctcgactgcacccagacctcggagcagctcggcaagagcgcgggcaaggacatc
gccgcgcagaaggcgacctacccctcgatcctcggcatggacaaggccgtgaaggaagcg
gcccgcctgacgaagaaggccgacgacgccctgaagatcttcggtgtcaagggggagacc
ctccgcgccatcgcggggtacatgctcgagcggaagaattag
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