Verrucomicrobium sp. GAS474: SAMN05444156_2820
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Entry
SAMN05444156_2820 CDS
T09813
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
veg
Verrucomicrobium sp. GAS474
Pathway
veg00550
Peptidoglycan biosynthesis
veg01100
Metabolic pathways
veg01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
veg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SAMN05444156_2820
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SAMN05444156_2820
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
veg01011
]
SAMN05444156_2820
Enzymes [BR:
veg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SAMN05444156_2820
Peptidoglycan biosynthesis and degradation proteins [BR:
veg01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SAMN05444156_2820
BRITE hierarchy
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
SDU24394
UniProt:
A0A1H2GXU3
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All DBs
Position
I:complement(3298723..3300801)
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AA seq
692 aa
AA seq
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MLFEPMAYARTRFVVVGGCFILGACVLLVRLWNIEVAEGKTYAGQQRDQTTVNVRLSPAR
GAIVDRNGVAFAENRASFDIDFYLDELVRNYRREHKNRLPMVTVPKRSGGTRQRIDIVKI
VTTYLEPISLNLGFAIKLDEKAINRHYETTPTIPFQYRSDVDFATLAKFSERSLGVPGIQ
IAVRPVRSYNYGAMAPHILGYVGVPDEKDVAALEDGELIPEEVGRHGLEKAFDGQLQGKP
GARVLQVDHRGYINKVEDEIPPTIGNSLRLTIDARMQYIVEQVLRRQGRASAVVMDPWNG
DILAMASVPSYDPNDFIPRISSDKWKNLIGDPTAPLLNRALSTYVPGSTFKVVVSLAAMK
AGKLTPNTTINCPSAIWIGNRLFHNDDKADRPAVDVKESLRLSINTFYYQLGIRIGINTI
KDFAEELGLGLPTELPLPEDKGLIPTPAWLKQVHPLDHWSDARTANVSIGQGEVGVSPVQ
MAVVMSAVANGGTVYYPRLIEGVNAFDGSEVVSVPTRVRGTIDAGKENLDAVREGLRQVV
DSGTATLVQLPYWKVAGKTGTAQAFRRVDGQTMRDLRTWFYCYAPYEKPRYVVCVLVEGG
EWGGSTNGPLVHDILEGLHQLELGQVPDLVYLNPAAGNFSGMTSYTAPAMPSDGPVSGTA
VPEDAADAPQSPPPENERFLPTSSKGPRGSKR
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgctctttgagccgatggcctacgcccgcacccgcttcgtcgtggtgggcggctgcttc
atcctcggggcctgcgtcctgctggtccgcctctggaacatcgaggtggcggaggggaag
acctacgcggggcagcagcgggaccagacgacggtcaatgtccgcctctccccggcgcgc
ggcgcgatcgtcgaccggaacggcgtcgccttcgccgagaaccgggcgagcttcgacatc
gatttctacctcgacgagctggtccgcaactaccgccgggaacacaagaaccgcctgccg
atggtgaccgtgccgaaacgctccggcggcacccgccagcggatcgacatcgtcaagatc
gtcaccacctacctggagccgatctccctcaacctcggcttcgccatcaagctcgacgag
aaggcgatcaaccgccactacgagacgacgccgacgatcccgttccaataccggagcgac
gtcgacttcgccacgctggcgaagttctccgagcggagcctcggcgtccccggcatccag
atcgcggtgcggcccgtccgctcctacaactacggggcgatggccccccacatcctcggc
tacgtcggcgtcccggacgagaaggacgtcgccgccctcgaggacggcgagctgatcccg
gaagaggtcgggcggcacggcctggaaaaggccttcgacgggcagctgcaggggaagccg
ggcgcgcgcgtcctccaggtcgaccaccggggctacatcaacaaggtcgaggacgagatc
ccgccgaccatcggcaattccctccgcctgaccatcgacgcccggatgcagtacatcgtc
gagcaggtcctccgccgccagggccgggcctcggccgtcgtcatggacccgtggaacggg
gacatcctcgcgatggcctcggtccccagctacgacccgaacgacttcatcccccgcatc
agcagcgacaagtggaagaacctcatcggcgacccgacggcccccctccttaaccgcgcc
ctcagcacctacgtccccggctcgacgttcaaggtcgtcgtcagcctcgccgcgatgaag
gcggggaagctgacgcccaacacgacgatcaactgccccagcgcaatctggatcgggaac
cgcctcttccacaatgacgacaaggccgaccgccccgccgtcgacgtgaaggaatcgctc
cgtctctcgatcaacaccttctactaccagctcggcatccgcatcgggatcaatacgatc
aaggacttcgccgaggaactcggcctcggcctgccgacggagctgccgctgcccgaggac
aaggggctgatcccgacccccgcctggctgaagcaggtccaccccctcgaccattggagc
gacgcccgcacggccaacgtctcgatcgggcagggggaagtcggcgtctcgcccgtccag
atggccgtcgtcatgtcggcggtcgccaacggcggcacggtctactatccccggctcatc
gagggggtgaacgcattcgacgggagcgaggtcgtctcggtgccgacccgggtccggggg
acgatcgacgccgggaaggagaacctcgacgcggtccgcgaggggctgcgccaggtcgtc
gactccggcacggcgacgctcgttcagcttccctactggaaggtggcggggaagaccggc
accgcgcaggccttccgccgcgtcgacgggcagacgatgcgcgatctccgcacctggttc
tactgctacgccccctacgagaagccccgctacgtcgtctgtgtcctcgtcgagggcggc
gaatggggcggcagcacgaacggccccctcgtccacgacatcctcgaggggctccaccag
ctcgagctcgggcaggtgcccgacctcgtctacctgaatcccgcggcgggcaacttcagc
ggcatgacctcctacaccgccccggcgatgccgagcgacgggccggtgtcgggaacggcg
gtccccgaggacgcggccgacgccccgcagagcccgccgcccgagaacgagcgcttcctc
cccacctcctccaagggtccccgcggatcgaaacgttaa
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