Verrucomicrobium sp. GAS474: SAMN05444156_2988
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Entry
SAMN05444156_2988 CDS
T09813
Name
(GenBank) alpha-mannosidase
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
veg
Verrucomicrobium sp. GAS474
Pathway
veg00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
veg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
SAMN05444156_2988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
veg04131
]
SAMN05444156_2988
Enzymes [BR:
veg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
SAMN05444156_2988
Membrane trafficking [BR:
veg04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
SAMN05444156_2988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Ams1-like_1st
Glyco_hydro38C2
Glyco_hydro_57
Motif
Other DBs
NCBI-ProteinID:
SDU27273
LinkDB
All DBs
Position
I:complement(3457077..3460112)
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AA seq
1011 aa
AA seq
DB search
MLKHPEITKGRLVRFASELKAVLYPRSVALEKLETYAAPGRIAYAEAVKGKFRPAKVGER
FGPGWSTHWFRIGYAVPKEWAGEEVLLHFDSSSEGCVWRDGVPIQGLTSYNWGPEEIRSH
YTLAAKAKGGERGVFYVEGAINGMFGLSDGGGRTQDEALGHLRQARLVTRDRLAWDLMWD
FAVIKEMAERLPADGLAQGPALTAANEIVNTVVLGDRSTYAAGRAIAKKFLAAKNGDRTH
HVSAIGHAHIDTAWLWPLAETMRKCYRTFSTAVLMMDTYPEYKFVCSQAQQLAWIKVQQP
ALYAKLKEKAKTGQFVPAGGTWIEPDCNIPSGESLVRQFLAGQRFFKREFGSYCEEFWNP
DVFGYSGALPQILRGAGIEYFLTQKLSWNQLNRPASSTFQWEGIDGSRVLTHFPPTDTYN
AVCTVEEIQKHITNFKDKERAAESYLLFGFGDGGGGPTEEMVERLRRMKNVAGLPEVAMR
TPREFFKRCDENLKDPTVWSGELYFELHRGTYTTQAANKRDNRRSEELLHDVEFLSFLAR
SLKGAKYPQAEINGLWETVLLNQFHDIIPGSSIREVYEDSDKDYARVLGSAGKLREEALA
KVVPAGNGKGKNVLALNTLGWPRREVASLGGKWTFAEAPAYGYTVAAPAAAPAAPVKVTL
GKNGFTLENGLVRAKFDGQGRLVSFLDKREADGGRETVEAGKKGNQYVLFEDRPERWDAW
DTDIYHLDKRTDVDAVKALRVVGDDPLRATVEVEMTVSAKATLTQRISLSAESPRLDFEA
EVDWREKDRFLKVEFPLALRSDYATFEIQFGHVRRPTHFNTTWDFARFEVSAHKWADLSE
PAYGVALLNDSKYGYACHGNVLRLSLLRAPKSPDPEADMGVHRFRYALYPHANGPQLGGV
IPEAAAFNQPLQVSATGAAPGAKGFFASTNPAVVIDTIKKAEDSDDLVVRLFESHGAHQN
ATFRSAFPIAKAAKVNLLEEGGKAVPVGKEGIKLALRPFEVVTLKLALKKG
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcaccccgaaatcaccaagggccgcctggtccgttttgcgagcgaactcaag
gctgttctctatccgcgctccgtggcgttggaaaagctggagacctatgccgcgccgggc
cggattgcctatgccgaggcggtgaaggggaagttccggcccgcgaaggtcggggagcgt
ttcggccccggctggtcgacccattggttccgcatcggctatgcggtgccgaaggagtgg
gcgggcgaggaggtcctcctccacttcgattcgtcgtccgaggggtgcgtctggcgggac
ggggtgccgatccagggattgacgagctataattgggggccggaggagatccgctcccac
tacaccctcgccgcgaaggcgaaggggggggagcggggcgtcttctacgtcgagggggcg
atcaacgggatgttcggcctgagcgacggcggcgggcggacgcaggacgaggcgctgggc
cacctccggcaggcgcggctggtgacgcgggaccggctggcctgggacctgatgtgggac
ttcgcggtgatcaaggagatggccgagcggcttcccgccgacggcctcgcccagggcccc
gcgctgacggcggcgaacgagatcgtcaataccgtggtcctgggcgaccgctcgacgtac
gcggcgggacgcgccatcgcgaagaagttcctggccgcgaagaacggggaccggacccat
cacgtctccgccatcggccatgcccacatcgacaccgcgtggctgtggcccctggccgag
acgatgcggaagtgctaccggacgttctcgaccgccgtcctgatgatggacacttatccc
gagtacaagttcgtctgctcccaggcccagcagctggcctggatcaaggtacagcagccc
gcgctctacgcgaagctgaaggagaaggcgaagacggggcagttcgtcccggcgggcggc
acgtggatcgagcccgattgcaatattccctcgggggaatcgctggtgcggcagttcctc
gccgggcagcgcttcttcaagcgggagttcggctcctattgcgaggagttctggaatccc
gacgtcttcggctacagcggcgcgctgccgcagatcctgcgcggggcggggatcgagtac
ttcctgacgcagaagctttcctggaaccagctgaaccggccggcgagcagcaccttccag
tgggaggggatcgacggctcgcgggtgttgacccacttcccgccaaccgacacctacaac
gcggtctgcacggtcgaggaaatccagaagcacatcacgaatttcaaggacaaggaacgg
gccgccgagagttacctgctcttcggcttcggcgacggcggcggcgggccgacggaggag
atggtggagcggctgcgccggatgaagaacgtcgccggacttcccgaggtggcgatgcgg
acgccgcgcgagttcttcaagcgctgcgacgagaacctgaaggacccgacggtctggtcg
ggcgagctttacttcgagcttcatcgcggcacctacacgacgcaggccgcgaacaagcgg
gacaaccggcgcagcgaggagctgctccacgacgtcgagttcctctccttcctggcccgt
tccctcaagggggcgaagtatccgcaggccgagatcaacggcctgtgggagacggtcctc
ctcaaccagttccacgacatcatccccggctcctcgatccgcgaggtctatgaggattcc
gacaaggattatgcccgcgtcctcggctccgccggaaagctgcgggaagaggcgctggcg
aaggtcgtcccggcggggaatgggaagggcaagaatgtcctcgccctcaacacgctgggc
tggccccgccgcgaggtggcctcgctcggcgggaaatggacttttgccgaggcaccggcc
tacggctataccgtggcggctccggcggcggccccagcggccccggtcaaggtgacgctg
gggaagaacggcttcaccctcgaaaacggtctggtccgggcgaagttcgacgggcagggg
cggctcgtcagcttcctcgacaagcgggaggccgacggaggccgtgagacggtcgaggcc
gggaagaaggggaatcagtatgtcctcttcgaggatcggcccgaacgttgggatgcctgg
gataccgacatctatcacctggacaagcggaccgacgtcgatgcggtgaaggcgctccgc
gtggtcggggacgacccgctgcgggcgacggtcgaggtcgagatgacggtgagtgcgaag
gcgacgctgacgcagcgcatctcgctttccgccgaatcgccccggctcgacttcgaggcc
gaggtcgactggcgcgagaaggaccgtttcctgaaggtcgagttcccgctcgccctccgc
agcgactacgcgaccttcgagatccagttcggccacgttcgccggccgacccatttcaac
acgacgtgggacttcgcccggttcgaggtcagcgcgcacaagtgggccgatctttcggag
cccgcctacggcgtcgctctcctcaacgactcgaagtacggctacgcctgccacggcaat
gtgctgcggctctccctcctccgcgccccgaagtcgcccgatcccgaggccgacatgggg
gtccatcgcttccgttacgcgctctatccccatgcgaacgggccgcagctcggcggggtc
atcccggaggcggcggcgttcaatcagccgttgcaggtttcggcgacgggggcggctccc
ggggcgaagggcttctttgctagcacgaacccggcggtggtgatcgacacgatcaagaag
gccgaggactcggacgacctcgtcgtccgtctcttcgagtctcacggcgcgcaccaaaac
gccacgttccgcagcgccttcccgatcgcgaaggcggcgaaggtcaacctgctggaggag
ggaggcaaggcggtccccgtcggcaaggaggggatcaagctggcgttgcgccccttcgag
gtggtgacgctgaagctggcgctgaagaaggggtag
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