Verrucomicrobium sp. GAS474: SAMN05444156_3146
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Entry
SAMN05444156_3146 CDS
T09813
Name
(GenBank) 16S rRNA (cytidine1402-2'-O)-methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
veg
Verrucomicrobium sp. GAS474
Brite
KEGG Orthology (KO) [BR:
veg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
veg03009
]
SAMN05444156_3146
Enzymes [BR:
veg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
SAMN05444156_3146
Ribosome biogenesis [BR:
veg03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SAMN05444156_3146
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
Motif
Other DBs
NCBI-ProteinID:
SDU29817
UniProt:
A0A1H2HD48
LinkDB
All DBs
Position
I:complement(3656687..3657508)
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AA seq
273 aa
AA seq
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MSSDPAPPSVSAPTAAGRLFVVGTPIGNLEDITLRALRVLKEADLVAAEDTRHSIHLLNH
FEIKKPLVSYHQFNEAKRVAEFREHFAHGKNIALISDAGMPGISDPGERLIRSCVEAGIT
VEVVPGPSAVLQALVGAGFPMVPFHFGGFLPPKSGGRRREMEEAAARPSTSVYFESPHRL
VRALADALEVIPERELCVARELTKKFEEIRRGTPAELLAHYEAHAPRGEVCLVIRGADAK
ELREAAKEAAREARFSEKESKKDSQEAAGELLD
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgatcccgcgcccccctccgtttctgccccgaccgccgcgggtcggctcttc
gtcgtcggcaccccgatcgggaacctggaagacatcaccctccgcgccctccgcgtcctg
aaggaggccgacctcgtcgccgccgaggacacccgccattcgatccacctgctgaaccat
ttcgagatcaagaagcccctcgtcagctaccaccagttcaacgaggcgaagcgggtcgcc
gagttccgggaacacttcgcccacgggaagaacatcgccctcatcagcgatgccgggatg
cccggcatctccgatccgggggagcgcctcatccggtcgtgcgtcgaggccgggatcacc
gtcgaggtcgtcccggggccgtcggcggtcctccaggccctcgtcggcgcggggttcccg
atggtgccgttccatttcgggggattcctcccgccgaagtcgggcgggcggcggcgggag
atggaggaggcggcggcccgtccctcgacctcggtctatttcgagtccccccaccgcctc
gtccgcgccctggccgacgcgctggaggtgatcccggaacgggagctctgcgtggcgcgg
gaactgacgaagaagttcgaggaaatccggcgcggcaccccggccgagctcctggcccat
tacgaggcccacgcgccgcgcggcgaagtctgcctcgtcatccggggggccgacgcgaag
gaactccgcgaggcggcgaaggaggcggcccgcgaggcccgcttctcagagaaggagtcg
aaaaaagactcgcaagaggccgccggggagctacttgattaa
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