Verminephrobacter eiseniae: Veis_0955
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Entry
Veis_0955 CDS
T00460
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
vei
Verminephrobacter eiseniae
Pathway
vei03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Veis_0955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vei03400
]
Veis_0955
Enzymes [BR:
vei01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Veis_0955
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Veis_0955
DNA repair and recombination proteins [BR:
vei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Veis_0955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_19
NFACT_N
DUF2835
Motif
Other DBs
NCBI-ProteinID:
ABM56733
UniProt:
A1WGH6
LinkDB
All DBs
Position
1069112..1069933
Genome browser
AA seq
273 aa
AA seq
DB search
MPELPEVEVTRRSFADAIAGARIQAVALGKPLRWPLGCDPMSLVGQQVLGLRRRGKYLLA
DTSGGLLLLHLGMSGSLRFSHGLPPAGVHDHFDLVTDRGTLRLHDPRRFGAVVYAPDEQA
PVALKLLGALGMEPLSDSFSLATFQSGLKKSRMPIKPLLLAGRLVVGVGNIYASEVLFLA
GIRPTAVASRVGAERVRRLHEAIRTVLTRAVQMGGSTLRNFSNADGMAGHFQSSAHIHVY
GRDGAPCHHCGSAIRLLRQGQRSSYFCPLCQRA
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgcccgaagtggaagtgacgcgccgcagctttgccgatgcgatcgccggt
gcgcgcatccaggccgtcgctctgggcaaaccgttgcgctggcccctgggctgtgatccc
atgtccctggtgggccagcaggtgctgggcctgcgcagacgcggcaagtacctgttggcg
gacaccagcggcgggcttttgttgttgcatctgggcatgtcggggagcttgcgtttcagc
catgggctgccgcccgcaggggtacacgatcacttcgacctggtgaccgaccgcggaacc
ctgcggctgcacgacccacgccggtttggtgcagtcgtttatgcgcccgacgagcaggcc
ccggtggcgctgaaactgctcggggctttgggaatggagcccttgtcggactctttttca
ttggccacttttcagtccggactgaaaaagagccggatgccgatcaagccactgctgctg
gccgggcgtctggtggtaggcgtgggcaacatctacgcctcggaagttctttttctggcg
ggcatccgccccacggcagtggcttcgcgcgtgggcgccgagcgggtgcgccgattgcac
gaggcgatacgcactgtgctgacgcgggccgtgcaaatgggcggcagcacgctgcgcaat
ttttccaatgccgatggaatggcgggtcatttccagagcagcgcccatatccatgtgtat
ggccgcgacggcgctccctgccaccattgcggcagcgccatacggctgctgcgccaagga
caaaggagcagttacttttgcccgctgtgccagcgggcctga
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