Vibrio sp. EJY3: VEJY3_00140
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Entry
VEJY3_00140 CDS
T01683
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vej
Vibrio sp. EJY3
Pathway
vej00071
Fatty acid degradation
vej00280
Valine, leucine and isoleucine degradation
vej00310
Lysine degradation
vej00362
Benzoate degradation
vej00380
Tryptophan metabolism
vej00410
beta-Alanine metabolism
vej00640
Propanoate metabolism
vej00650
Butanoate metabolism
vej00907
Pinene, camphor and geraniol degradation
vej00930
Caprolactam degradation
vej01100
Metabolic pathways
vej01110
Biosynthesis of secondary metabolites
vej01120
Microbial metabolism in diverse environments
vej01200
Carbon metabolism
vej01212
Fatty acid metabolism
Module
vej_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vej00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
VEJY3_00140 (fadB)
00650 Butanoate metabolism
VEJY3_00140 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
VEJY3_00140 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VEJY3_00140 (fadB)
00310 Lysine degradation
VEJY3_00140 (fadB)
00380 Tryptophan metabolism
VEJY3_00140 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
VEJY3_00140 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
VEJY3_00140 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
VEJY3_00140 (fadB)
00930 Caprolactam degradation
VEJY3_00140 (fadB)
Enzymes [BR:
vej01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
VEJY3_00140 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
VEJY3_00140 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
VEJY3_00140 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
VEJY3_00140 (fadB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Carboxyl_trans
DUF5546
DAO
Motif
Other DBs
NCBI-ProteinID:
AEX20528
LinkDB
All DBs
Position
1:complement(28795..30966)
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQAETLQVKEIQDGIAELSFCSPKSVNKLDLATLESLDKALDALIAHQGLKGVMLTSD
KDAFIVGADITEFLGLFAKTDEELDQWLQFANSIFNKLEDLPVPTISVIKGHALGGGCEC
VLATDMRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADNAMEIITQGKALRADEALK
LGLLDAVVDSDSLHASALQTLTSAINEKLDWQARRKQKTSPLTLSKLESMMSFTMAKGLV
AQKAGPHYPAPITSVLTIEEGARFARNEALDVERKHFVKLAKSEEAKSLVGLFLSDQYIK
GIAKKAAKSANKDTKRAAVLGAGIMGGGIAYQSALKGVPVLMKDIAQASLDLGMNEASKL
LNKRLATGRLDGFKMAGILASITPSLHYAGIENSDVIVEAVVENPKVKAAVLSEVEQNVG
EDTVITSNTSTIPINVLAQSLQRPENFCGMHFFNPVHRMPLVEIIRGEKTSDETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTQIDKIMERKFGWPMGPAY
LLDVVGIDTAHHAQAVMAEGFPERMGKQGRDAIDTLFEANKFGQKNGSGFYSYSVDKKGK
PKKTFSEEILPLLADVCADKRDFDEQTIIQRMMIPMINEVVLCLQEGIIATPQEADMALV
YGLGFPPFRGGVFRYLDSVGIAEYIETAKQHAELGAMYQVPQMLIDMAAKGETFYGAQQQ
GSI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaagccgaaaccctacaggtaaaggaaatacaggatggcattgcagagctg
agtttctgctcgccaaaatccgtaaataaactcgatttagcgacactagagtcactagac
aaagcccttgatgcacttatcgcacaccaaggtctgaaaggcgtaatgctgacttcagat
aaagatgcgttcattgtaggtgcagacattactgaattcttaggcctgtttgctaagact
gatgaagaactggatcagtggctacaattcgccaacagcatcttcaacaaacttgaagac
cttccagtcccaaccatctcagtcatcaagggccacgctcttggtggtggctgcgagtgt
gtattggcaacagacatgcgcatcggtgacaaaaccaccagcatcggtctaccagaaacg
aaacttggcatcatgccaggctttggtggttgtgtacgtctacctcgtgttatcggtgct
gataacgcgatggaaatcattacacaaggtaaagcgctccgtgctgatgaagcactaaaa
cttggcctgttagatgcggttgtcgattcagactctctgcatgcatccgctctgcaaaca
ctgacgtctgcaatcaacgaaaaacttgattggcaagctcgccgcaaacaaaaaacatca
ccactaacgctaagcaagctagagtcgatgatgagcttcaccatggcaaaaggcctggtg
gcgcaaaaagcgggcccacactacccggcaccaatcacatcagtccttactattgaagaa
ggcgctcgatttgcacgtaatgaagcgctggatgttgaacgtaagcacttcgttaaactg
gcaaaatcagaagaagcgaaatcactggttggtctgttccttagcgatcagtacattaaa
ggcatcgctaaaaaagcggcaaaatcagcaaacaaagacactaaacgtgctgctgtactt
ggcgcaggtatcatgggtggcggtatcgcttaccaatctgcactgaaaggtgtgcctgta
ctgatgaaagacatcgctcaggcatctctagatttgggcatgaacgaagcgtcgaaactg
ctgaataagcgtcttgctacgggtcgtcttgacggcttcaagatggcgggcatcctcgcg
tctattactccaagcttgcactacgctggcatcgaaaactcagatgtgattgtcgaagcc
gtggttgagaatccgaaagtaaaagctgcggtacttagcgaagtcgagcaaaacgtgggc
gaagatacggttattacgtctaacacatcgaccattccaatcaacgttctggctcagtca
ctacaacgcccagaaaacttctgtggtatgcatttctttaaccctgtgcatcgcatgcca
ttggttgagatcatccgcggtgaaaaaacgtcagatgaaaccatcaaccgtgttgtggct
tacgcagcgaaaatgggtaaatcaccaatcgtcgttaatgactgccctggtttcttcgta
aaccgcgtactgttcccgtactttggtggtttcagcatgctgcttcgtgacggcgctgac
ttcactcaaatcgacaaaatcatggaacgcaagtttggttggccaatgggtccagcatac
ttgcttgacgttgtaggtatcgataccgctcaccacgcacaagccgtcatggctgaaggc
ttcccagagcgtatgggcaagcaaggtcgcgatgcgattgatactttgtttgaagccaac
aagtttggccagaaaaatggcagcggtttctacagctattcagttgataagaaaggtaaa
ccgaagaagaccttctctgaagaaatcttgccactgttagctgacgtatgtgcagataaa
cgtgacttcgacgagcaaaccatcatccaacgaatgatgattcctatgatcaacgaagtg
gtgctgtgtctacaggaaggcattatcgcgacaccacaagaagcggacatggctctggtt
tacggtctgggcttccctccattccgcggcggtgtattccgctacctagacagcgttggt
attgctgagtacatcgaaacagcaaaacaacacgctgaactaggcgcgatgtaccaagta
ccgcaaatgctgattgatatggcagccaaaggagagaccttctacggcgcacaacagcaa
ggctctatctaa
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