Vibrio sp. EJY3: VEJY3_00490
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Entry
VEJY3_00490 CDS
T01683
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vej
Vibrio sp. EJY3
Pathway
vej03030
DNA replication
vej03410
Base excision repair
vej03420
Nucleotide excision repair
vej03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VEJY3_00490
03410 Base excision repair
VEJY3_00490
03420 Nucleotide excision repair
VEJY3_00490
03440 Homologous recombination
VEJY3_00490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vej03032
]
VEJY3_00490
03400 DNA repair and recombination proteins [BR:
vej03400
]
VEJY3_00490
Enzymes [BR:
vej01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VEJY3_00490
DNA replication proteins [BR:
vej03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
VEJY3_00490
DNA repair and recombination proteins [BR:
vej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
VEJY3_00490
NER (nucleotide excision repair)
GGR (global genome repair) factors
VEJY3_00490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
AEX20597
LinkDB
All DBs
Position
1:113435..116227
Genome browser
AA seq
930 aa
AA seq
DB search
MASIPENPLILIDGSSYLYRAFHAYPGTMSNGEIPTNAVYGVVNMLRSMMRQFASDRIAV
VFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLICVPGVEADDVIGT
LAYQASQKGMPVLISTGDKDMAQLVDDNITLINTMTNVVMDREGVIEKFGIPPELIIDYL
ALMGDKVDNIPGVPGVGDKTATALLQGIGGLTKLYENLDDIAPLGFRGSKTMAKKLVDNK
ENAMLSYELATIKLDVELEETPESLLKAEPSKDELIKLYGQLTFKSWLNELLEGGSGAVE
AVEMAGSARASSASSHAEMETSAVTIDRSQYETILDEASFNAWLEKLKASELFAFDTETD
SLDYMVANLVGLSFAVGEGIAAYVPVAHDYLDAPQQLDRDWVLEQLKPILEDESQAKVGQ
NLKYDASVLARYGIEMKGIKHDTMLASYVYNSVGGKHDMDSLALRFLQHSCISFEQVAGK
GKKQLTFNQIELDQASPYAAEDADVTLRLHNRLFANIEQDEKLKSVYEDIEMPLVPVLSR
IERTGVLIDDMKLGAQSVEIAARLEELEKKAYEIAEQEFNMNSPKQLQAILFEKMGLPVV
KKTPSGTPSTNEEVLQELALDYPLPKLILEYRGLAKLKSTYTDKLPKMINPTTGRVHTSY
HQAVTATGRLSSTDPNLQNIPIRNEEGRRIRQAFVAPTGYKILAVDYSQIELRIMAHLSG
DQALLDAFRDGKDIHAATAAEIMGVGIDQVSSEQRRRAKAVNFGLIYGMSAFGLAKQLGI
PRGEAQTYMDKYFERYPGVMQYMEDTRSAAADQGYVETIFGRRLHLPEIKSRNGMRRKAA
ERAAINAPMQGTAADIIKKAMLLVDQWIQAEGDGRVKLLMQVHDELVFEVEELSLSEIES
KVQKLMESAAELKVPLVAEAGHGDNWDQAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtattcctgaaaatccgctgattcttatcgacggttcttcttatctatatcgc
gcttttcacgcctacccaggcacaatgagtaatggtgaaataccaactaatgccgtctac
ggtgtagtaaacatgctacgcagtatgatgcgtcagtttgcgtctgatcgtattgcagtg
gtttttgacgcgaagggtaaaaccttccgtgacgatatgtatccagaatacaaagcgaat
cgtccgcctatgccggatgatcttcgttgccaaatcgagccgttacataatgtgattcgc
gcaatgggcttgcctttaatttgtgttcctggcgtagaagcggatgacgtcattggtact
ttggcttatcaggcatcacaaaaaggcatgccagtattgatcagtaccggtgataaagac
atggcgcagttggtggatgacaatatcaccctgatcaacaccatgaccaatgttgtgatg
gatcgtgaaggtgtgattgaaaagttcggcattccaccggagttgatcatcgattacctg
gcgttaatgggtgataaagtcgacaacattccgggtgtaccgggcgtgggtgataaaact
gcaactgcgttgttgcaaggtatcggtggcctgacgaagctttacgaaaacttagatgat
attgctccactgggtttccgtggttcaaaaaccatggcgaagaagctagtcgacaacaaa
gaaaatgcaatgctgtcgtacgaactcgccactattaagctcgatgttgaactggaagaa
acgccggaatcactgctcaaagcagaaccaagcaaagacgaactgatcaagttatatggt
caactgacgtttaagtcttggctcaatgagctgttagaaggcggctcaggcgctgtagaa
gcggtcgaaatggctgggtctgcacgcgcatcatcagcttcttctcatgctgagatggaa
acgtcagcagtgacgattgatcgcagtcagtacgaaaccattttagacgaagcgtctttt
aatgcttggttagaaaaactaaaagcctctgaattgtttgctttcgatacggaaacggac
agtctcgactacatggtagcgaatctggttggtctctcgtttgcggtaggcgaaggcatc
gcagcttatgtccctgttgctcatgactaccttgatgcaccgcagcagctagaccgcgac
tgggtgttagagcagttaaaacctatcttagaagatgagtcgcaagcgaaagtcggccag
aacctgaaatacgatgcatctgttttagctcgctacggcattgagatgaaaggtattaag
cacgataccatgctggcttcttacgtatacaacagcgtaggcggcaaacatgatatggac
agcttagcgctacgtttccttcagcatagctgcatctcctttgagcaagttgcaggtaaa
ggtaaaaagcagcttacttttaatcaaattgaactcgatcaagcgtccccatacgcagca
gaagatgcagatgtcactcttcgtctgcacaaccgtctgtttgctaatattgaacaagac
gaaaagcttaaatcggtgtacgaagatatcgaaatgccgcttgttcctgtgctttctcgt
atcgagcgcactggggtattgattgatgacatgaagctgggcgctcagtcagtagaaatc
gccgctcgccttgaagagcttgagaaaaaagcttacgaaattgcagagcaagagttcaac
atgaactcaccaaaacagttacaagctatcctgtttgagaaaatgggtttaccggtagtg
aaaaagacaccatctggcacgccttcgaccaacgaagaagttctgcaagagttggctcta
gactacccattaccaaaactgattcttgaataccgtggtctggcaaagcttaaatcgact
tacaccgataagctgccgaagatgattaatccgaccacaggacgcgtacatacctcttac
catcaagcggtaacggcgactggtcgtttgtcatcaaccgatccaaacctacaaaacatt
ccaattcgtaatgaagaaggacgccgtattcgccaggcatttgttgcaccgacgggttac
aaaatcctggcggtcgactattcacaaatcgaactgcgcattatggctcacctttctggc
gaccaggctctgcttgatgcattccgcgatggtaaagacattcacgccgccactgctgct
gaaatcatgggcgtgggcattgatcaagtctctagtgaacagcgtcgccgagcgaaagcg
gttaacttcggtcttatctatggtatgagtgcgttcggcttagcgaaacagttaggcatc
ccacgtggagaagcacaaacctacatggataagtacttcgagcgttacccaggtgtgatg
cagtatatggaagacacgcgcagtgctgcagccgatcaaggttatgttgaaaccatcttt
ggtcgtcgtttacacctaccagagattaaatctcgtaacgggatgcgtcgtaaagcagca
gaacgtgcggcgatcaatgcgccaatgcaaggtacagcggcagacatcatcaagaaagcg
atgttacttgttgaccaatggattcaggctgaaggtgacggtcgagtgaaacttttgatg
caagtacacgatgaactggtatttgaggttgaagagttatcattgtccgaaattgaaagt
aaagtacagaaattgatggaatctgcagcagagctgaaagtgcctctggttgcagaagct
ggccatggtgacaactgggatcaggctcactag
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