Vibrio sp. EJY3: VEJY3_00955
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Entry
VEJY3_00955 CDS
T01683
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
vej
Vibrio sp. EJY3
Pathway
vej00541
Biosynthesis of various nucleotide sugars
vej01100
Metabolic pathways
vej01250
Biosynthesis of nucleotide sugars
Module
vej_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
vej00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
VEJY3_00955 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vej01005
]
VEJY3_00955 (rfaD)
Enzymes [BR:
vej01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
VEJY3_00955 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
vej01005
]
Core region
VEJY3_00955 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
ThiF
adh_short
KR
Phage_T7_Capsid
2-Hacid_dh_C
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
AEX20690
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Position
1:complement(216713..217654)
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AA seq
313 aa
AA seq
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MIIVTGGAGMIGSNIVKALNAAGMNDILVVDNLKNGKKFKNLVDLDITDYMDRDDFLTQI
MAGDDFGPIEAIFHEGACSATTEWDGKYMMLNNYEYSKELLHYCLDREIPFLYASSAATY
GETDTFVEEREYEGALNVYGYSKQQFDNYVRRLWQDAEEHGETLSQITGFRYFNVYGPRE
DHKGSMASVAFHLNNQLNAGENPKLFAGSETFKRDFVYVGDVCKVNLWFFENGVSGIFNC
GTGRAESFEEVAKAVITHHGKGEIETIPFPEHLKGAYQEFTQADLTKLRSAGCDVEFKTV
AEGVAEYLAIQNR
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgtaactggtggtgctggcatgattggcagcaacattgttaaagctctcaac
gcagctggtatgaacgatattctggttgtcgacaacctaaaaaatggtaaaaagtttaag
aacttagttgatctggacatcacagattacatggatcgtgacgacttccttacccaaatt
atggccggtgatgatttcggtcctatcgaagcaattttccatgaaggtgcttgttctgca
accaccgagtgggatggtaaatacatgatgctaaacaactatgagtactcaaaagagtta
ttgcattattgtttagaccgtgaaattccattcctttacgcctcttctgctgccacatac
ggtgagacagacacctttgttgaagagcgagaatacgaaggcgcactcaacgtctacggt
tattctaagcaacagtttgataactacgtacgtcgcttatggcaagacgctgaagagcac
ggtgagaccctatctcaaatcactggcttccgttacttcaatgtttacggccctcgtgaa
gaccataaaggaagcatggcatccgttgccttccacctaaataaccagctaaatgcaggt
gaaaacccgaaactcttcgctggtagtgagacctttaagcgtgatttcgtctacgtcggc
gatgtatgtaaagtcaacctgtggttctttgaaaacggagtatcaggcatctttaactgt
ggcacaggacgcgcggagtcgtttgaagaggtcgcgaaagcggtgatcactcaccacgga
aaaggtgaaatcgaaacgattcctttccctgagcatctaaaaggcgcttaccaggagttc
actcaagctgatctgactaagctacgctcagcaggctgcgacgtagaattcaaaacggtt
gcagaaggtgtcgctgaatacctagctatccaaaaccgctaa
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