Vibrio sp. EJY3: VEJY3_02135
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Entry
VEJY3_02135 CDS
T01683
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
vej
Vibrio sp. EJY3
Pathway
vej00220
Arginine biosynthesis
vej00240
Pyrimidine metabolism
vej00250
Alanine, aspartate and glutamate metabolism
vej01100
Metabolic pathways
vej01110
Biosynthesis of secondary metabolites
vej01240
Biosynthesis of cofactors
Module
vej_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
vej00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
VEJY3_02135 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
VEJY3_02135 (carB)
00220 Arginine biosynthesis
VEJY3_02135 (carB)
Enzymes [BR:
vej01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
VEJY3_02135 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
CoA_binding_2
Epimerase
GSH-S_ATP
Motif
Other DBs
NCBI-ProteinID:
AEX20925
LinkDB
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Position
1:468416..471649
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AA seq
1077 aa
AA seq
DB search
MPKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIQWEVVRKIIEKERPDAVLPTMGGQTALNCALDLEKHGVLEEFGVEMIGATA
DAIDKAEDRSRFDKAMKSIGLECPRADTAKSMEEAYKVLDMVGFPCIIRPSFTMGGTGGG
IAYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKADNCIIVCSIENFDPM
GIHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELQNDITGGATPASFEPTIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLHKALRGLEVGATGFDEMVDLEAPDA
LTKIRHELKEAGAERIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVKLEEEVKAGG
YAGLTKDVLRQLKRKGFSDARLSKLLGVAESEIRRAREQFDIHPVYKRVDTCAAEFSSDT
AYMYSSYDEECEANPTDKDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLSIARVEKPKGVIVQYGGQTPLKLARALEAAGVPI
IGTSPDAIDRAEDRERFQAAVERLGLLQPQNATVTTMEQAVEKSKEIGFPLVVRPSYVLG
GRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATEVDIDAICDGERVVIGGIMEH
IEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFELGVRGLMNTQFAVKGNDVYLIE
VNPRAARTVPFVSKATGAPLAKIAARVMAGQSLESQGFTKEIIPPYYSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGSVYPEGGRALLSVREGDKERVVDLA
SKLVKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNNEYTYIVNTAAGRQ
AIEDSKVLRRGALAEKVNYTTTLNAAFATCMSHTADAKASVTSVQELHAKVKASLEA
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtactgacattcaaagtattctaattcttggtgctggtccgattgttatc
ggtcaggcatgtgagtttgactactctggcgcacaagcgtgtaaagcacttcgtgaagaa
ggctaccgagttattctggttaactcgaaccctgcgacaatcatgactgacccagagatg
gctgatgcgacttacatcgagccaatccaatgggaagtggtacgcaagatcatcgaaaaa
gagcgtccagatgcggttctaccgacaatgggtggtcagactgcgcttaactgtgctcta
gatctagagaagcacggcgttcttgaagagttcggcgtagaaatgattggtgcaaccgct
gacgcgattgataaagcggaagaccgttctcgtttcgataaagcaatgaagtctatcggc
cttgagtgtcctcgcgcagatactgcgaagagcatggaagaagcttacaaagttttagac
atggttggcttcccttgtatcatccgtccatcatttacgatgggtggtactggtggcggt
atcgcttacaacaaagaagaattcgaagaaatctgtcgtcgtggtctggatctttctccg
actaacgaactgcttatcgatgaatctctaatcggttggaaagagtacgaaatggaagta
gttcgcgacaaagcggacaactgtatcatcgtatgttcaatcgaaaacttcgacccaatg
ggcatccacactggtgactcaatcacagtagcgccagcacaaacactgactgacaaagaa
taccagctaatgcgtaacgcatcgctagcagttctgcgtgaaatcggtgtggaaacaggt
ggttcaaacgtacagtttggtatcaacccgaaagatggccgtatggttatcatcgagatg
aacccacgtgtatctcgttcttctgctctagcgtcaaaagcaacgggtttcccaatcgct
aagattgcagcgaaactggctgttggctttactctggacgagctacaaaacgacatcact
ggtggtgcaactccagcatcattcgaaccaactatcgactacgtagtaactaagattcct
cgctttaacttcgagaaatttgcaggtgctaacgaccgtctgacaacacagatgaagtca
gttggtgaggtgatggcgattggtcgtaaccaacaagaatctcttcacaaagctctacgt
ggcctagaagttggcgcgactggctttgacgagatggttgacctagaagcgccagatgca
ttgactaagattcgtcacgagctgaaagaagctggtgctgagcgtatctggtacattgct
gacgcattccgtgcgggcatgtctgttgatggtgttttcaacctgactaacatcgaccgc
tggttcctggttcaaattgaagaactagtgaaactagaagaagaagtgaaagcaggcggt
tacgctggcttgaccaaagacgttcttcgtcaacttaagcgcaaaggcttctctgatgct
cgcctgtctaaattacttggtgttgctgaaagcgaaattcgtcgcgctcgtgaacaattc
gatattcacccggtttacaaacgtgtggatacgtgtgcagcagaattctcttctgacacg
gcttacatgtactcatcttacgatgaagagtgtgaagcaaacccaacagacaaagacaag
atcatggttcttggtggcggtccaaaccgtatcggccaaggtatcgaattcgattactgt
tgtgtacacgcatcgctagcactgcgcgaagacggttacgaaaccattatggttaactgt
aacccagaaacggtatctactgactacgatacgtctgaccgtttgtacttcgaaccagta
acgctggaagacgtactgtctatcgctcgcgttgaaaagccaaaaggtgtgattgttcag
tacggtggtcaaacgccacttaaactggctcgcgcactagaagctgcaggcgtgccaatc
attggtactagccctgatgcaatcgaccgcgcagaagaccgtgagcgtttccaagctgct
gttgagcgtctaggccttcttcaaccacaaaacgctaccgttacaacaatggagcaagcg
gttgagaagtctaaagaaatcggcttcccattggttgttcgtccatcttacgtactaggt
ggccgtgcgatggaaatcgtatacgacgagcaagacttacgtcgctacttcaacgaagcg
gtaagcgtatcgaacgagtctccagttctactagaccgtttcctagatgatgcaactgaa
gttgatatcgacgctatctgtgatggtgagcgtgttgttatcggcggtatcatggagcac
atcgagcaagcaggtgttcactcaggtgactcagcatgttcacttccagcttacacgcta
agccaggaaatccaggataagatgcgtgagcaagttgagaagttagcatttgaactaggt
gtacgcggtctgatgaacacgcagtttgcagtgaaaggcaacgacgtttacctaatcgaa
gttaaccctcgtgctgcgcgtacggtaccattcgtttcgaaagcaacaggcgcaccacta
gcgaaaatcgctgcacgtgtaatggcgggtcaatctctagagtcgcaaggctttactaaa
gagattattcctccttactactcagtgaaagaagtggttctaccgttcaacaaattccct
ggtgttgacccactattgggcccagaaatgcgctcaacaggtgaagtaatgggtgttggt
gcaacgtttgcagaagcttatgcaaaagcagaactaggctgtggcagcgtttaccctgaa
ggtggccgtgcgctactatcagtacgtgaaggcgataaagagcgtgtggttgacctggct
tctaagctagtgaaactaggctaccagttggatgcgacacacggtacagctgtgattcta
ggcgaagcgggtatcaaccctcgtctagtaaacaaagtacatgaaggtcgtcctcacatt
ctggaccgtattaagaacaacgaatacacctacatcgtgaacacggcggcaggtcgtcaa
gcgattgaagattcgaaagttctgcgtcgcggtgccctagctgagaaagtgaactacaca
acgactctgaacgcagcgttcgctacgtgtatgtctcacacagctgatgcaaaagcgtct
gtgacttctgttcaagagctacacgctaaagtgaaagcgagtctagaagcgtaa
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