Vibrio sp. EJY3: VEJY3_03285
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Entry
VEJY3_03285 CDS
T01683
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vej
Vibrio sp. EJY3
Pathway
vej00260
Glycine, serine and threonine metabolism
vej00460
Cyanoamino acid metabolism
vej00630
Glyoxylate and dicarboxylate metabolism
vej00670
One carbon pool by folate
vej00680
Methane metabolism
vej01100
Metabolic pathways
vej01110
Biosynthesis of secondary metabolites
vej01120
Microbial metabolism in diverse environments
vej01200
Carbon metabolism
vej01230
Biosynthesis of amino acids
vej01240
Biosynthesis of cofactors
vej04981
Folate transport and metabolism
Module
vej_M00140
C1-unit interconversion, prokaryotes
vej_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
vej00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VEJY3_03285 (glyA)
09102 Energy metabolism
00680 Methane metabolism
VEJY3_03285 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VEJY3_03285 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VEJY3_03285 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VEJY3_03285 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VEJY3_03285 (glyA)
Enzymes [BR:
vej01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VEJY3_03285 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AEX21155
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Position
1:747125..748375
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AA seq
416 aa
AA seq
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MLKRDMNIADYDAELFAAIQEETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDKAEQLAIDRACELFGCEYANVQPHSGSQANSAVYMALLNPGDTVLGMS
LAHGGHLTHGSPVNFSGKHYNVIPYGIDEAGQINYDEMEALAIEHKPKMIIGGFSAYSQI
VDWKRMREIADKVDAYLFVDMAHVAGLIAAGVYPTPVPYAHVVTTTTHKTLAGPRGGLIL
SNAGEDMYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEAMEPEFKAYQARVVENAKAMVAQ
FQERGYKIVSNGTENHLFLVDLIDKNITGKEADAALGAANITVNKNSVPNDPRSPFVTSG
IRVGTPAITRRGFTVEDAKELANWMCDVLDSIDNEEVIEATKQKVLDICKRLPVYA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcgtgatatgaacatcgcagattacgatgcggaactgttcgcagctatccag
gaagaaactcttcgccaggaagaacacattgaacttatcgcttctgaaaactacacaagc
ccacgtgtaatggaagctcaaggttctcagctaacgaacaaatacgctgaaggctaccca
ggcaagcgttactacggcggttgtgagtacgtagataaagcggaacaattagcaatcgat
cgtgcatgtgaactattcggttgtgaatacgcaaacgtacagcctcactctggttctcaa
gcaaacagcgcagtatacatggcgcttctgaacccaggcgatacagtattaggcatgagc
ctggcacacggtggtcacctgactcacggttcaccagtaaacttctctggtaagcactac
aacgttatcccttacggtatcgacgaagctggtcaaatcaactacgacgagatggaagcg
cttgcgattgagcacaagcctaagatgatcatcggtggtttctcagcttactctcaaatc
gttgattggaaacgcatgcgtgaaattgcagacaaagttgatgcttacctattcgtagat
atggctcacgttgctggtcttatcgcagcaggcgtttacccaacaccagtaccatacgca
cacgttgtaacaacaacgacgcacaaaacactagcaggtccacgtggtggtcttatcctg
tctaatgctggcgaagacatgtacaaaaagctgaactcagctgttttccctggtggtcaa
ggtggtcctctaatgcacgttatcgctggtaaagctgtagcgttcaaagaagctatggaa
cctgaatttaaagcataccaagctcgcgttgttgaaaacgcgaaagcaatggttgctcag
ttccaagagcgcggttacaaaatcgtttctaacggtacagaaaaccacctgttcctagtt
gatctaatcgacaagaacattactggtaaagaagctgacgcagcactaggtgcagcgaac
atcacagtaaacaaaaactcagtaccaaatgacccacgtagcccattcgtaacgtctggt
atccgtgtaggtacgccagcaatcactcgccgtggcttcacagtagaagacgcaaaagag
ctagcgaactggatgtgtgacgttcttgatagcatcgacaacgaagaagttatcgaagcg
acaaaacagaaagtgcttgatatctgtaagcgtctaccagtttacgcataa
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