Vibrio sp. EJY3: VEJY3_03320
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Entry
VEJY3_03320 CDS
T01683
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
vej
Vibrio sp. EJY3
Pathway
vej00550
Peptidoglycan biosynthesis
vej01100
Metabolic pathways
vej01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vej00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VEJY3_03320
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VEJY3_03320
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vej01011
]
VEJY3_03320
Enzymes [BR:
vej01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
VEJY3_03320
Peptidoglycan biosynthesis and degradation proteins [BR:
vej01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
VEJY3_03320
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GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AEX21162
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Position
1:complement(754031..755956)
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AA seq
641 aa
AA seq
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MIHRRRSQIRDYQAEARLFASRAIVAFIGIVILMGALVANMYNIQVNQFQDYQTRSNDNR
IKIVPIAPNRGLIYDRNGVLLAENRPVFNLELTPEKVKDIDETIKELQTILEITPEQIER
FHRERKRTRRFKSVPLLTQLDEKQVAVFSVNQYRFPGVEISATLKRYYPFSEVLTHVIGY
VSRINDRDIQRLIREEKASNYQATRDIGKLGIEKYYEDILHGTAGYQEVEVNSRGRVIRT
LKYVPPVPGKDIVLNLDINLQLYVHQLLDGRRGSAVVIDPRDNGVLAMVSSPSYDPNAFV
HGISGKAYRALLNDKNRPLVNRTTLGIYPPASTIKPFMAVAALQEGVVTPQTTRNDPGYW
RIPNSDTRPFRDWLRWGHGRVDIIKSIEESVDTFFYQVAYDMGIDRISSWMMMFGFGDYT
GIDIYEESKANMPTREWKMSRHRTPWYKGDTIPVGIGQGYWTATPMQIAKATSVLVNDGA
VTAPHLLKASINNGGDFDEQHSEEYLSYPPIKDVPKKYWDMAKEGMRRVNHGVRGTARRS
FYDMSYETAGKSGTAQVFGLAEDEEYKADEVAEHLRDHALFTGFAPFDDPKVVVTVVLEN
AGGGSSNGAPVARKIFDRVVLGPEKIEPEEDENNVKQEATQ
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgattcatagacgccgcagtcaaattcgagattatcaagccgaagcgcgcctgtttgcc
agccgcgctatcgttgcatttatcggtatcgtcattttgatgggagccctggtcgccaac
atgtacaacattcaggtgaaccagttccaagattaccaaactcgctctaacgacaaccgt
attaaaatcgtaccaattgcgcccaaccgcgggcttatttacgatcgcaacggtgtgtta
ctggcggaaaaccgccctgtctttaacctggaactgactccagaaaaagtgaaagacatt
gatgagaccatcaaagagctgcaaaccattctggaaatcacaccagagcaaattgaacgc
tttcatcgcgagcgaaaacgcacccgtcgctttaaatctgttcctcttctcactcaactg
gatgaaaagcaggttgccgtattttcagtcaaccaatatcgctttcccggcgtagaaatc
agtgcgaccctaaaacgttactacccatttagtgaagtgcttacccacgtgattggctat
gtttctcgcatcaacgatcgagacatacaacgcctgattcgtgaagaaaaagcctcgaac
tatcaagcgacccgtgacatcggtaagctcggcattgagaaatattacgaagatattctc
catggaactgctggctaccaagaggtcgaggtgaacagtcgtggtcgagtgatccgcaca
ctgaaatatgtcccacccgttcctggcaaagatattgtattgaacctggacattaatctg
cagctttatgtgcaccagttgcttgatggtcgtcgcggcagtgccgtggttatcgaccca
agagataacggtgtgctagcgatggtatctagcccgagctacgatcccaatgccttcgtt
catggtatttctggtaaggcttaccgtgcgctacttaacgataaaaaccgacctctggtg
aaccgaacgacattaggtatttatccaccagcgtcaaccatcaaaccatttatggccgtt
gccgcgctgcaagaaggcgttgtgactccacaaacaacccgtaatgatcctggctactgg
cgtattccaaattccgacactcgccctttccgcgactggctgcgttggggacatggccgt
gttgatatcatcaaatcaattgaagaatcggtggataccttcttctaccaggtggcttac
gatatgggcatcgatcgcatttccagctggatgatgatgttcggctttggtgattacacc
ggaattgatatttacgaagaaagtaaagccaacatgccaacccgtgagtggaaaatgtct
cgccacagaacaccttggtataaaggcgatacgatcccggtaggtattggtcagggttac
tggactgcaacgccgatgcaaatcgctaaagcgacgtcagtgctggtcaacgacggagcc
gttaccgccccacacttacttaaagcttccatcaacaatggtggcgatttcgatgagcag
cactcagaggaatacctgagttatccgccgattaaagacgttccgaaaaagtactgggat
atggcgaaagaaggcatgcgccgtgtaaaccatggggttcgaggtacagctcgtcgttcg
ttttacgacatgagctacgaaaccgccggtaaatccggtaccgctcaggtattcggactg
gctgaagacgaagagtacaaggcagatgaagtcgccgaacatttgcgtgaccacgcctta
tttactggttttgcaccgtttgatgatccaaaagtagtcgtgactgtggtactcgaaaat
gcgggtggcggctcaagtaatggcgcgcctgtagcaagaaaaatctttgaccgtgtcgta
ctcggcccggaaaaaatcgagcctgaagaagatgaaaacaacgttaagcaagaggcaacg
caataa
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