Vibrio sp. EJY3: VEJY3_05535
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Entry
VEJY3_05535 CDS
T01683
Name
(GenBank) DNA-binding protein H-NS
KO
K03746
DNA-binding protein H-NS
Organism
vej
Vibrio sp. EJY3
Brite
KEGG Orthology (KO) [BR:
vej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vej03036
]
VEJY3_05535
03400 DNA repair and recombination proteins [BR:
vej03400
]
VEJY3_05535
Chromosome and associated proteins [BR:
vej03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
VEJY3_05535
DNA repair and recombination proteins [BR:
vej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VEJY3_05535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DNA_ligase_A_N
DUF3037
Knl-2-like_dom
PTH2
RdfA
GTA_holin_3TM
WEF-hand
Motif
Other DBs
NCBI-ProteinID:
AEX21601
LinkDB
All DBs
Position
1:complement(1245419..1245826)
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AA seq
135 aa
AA seq
DB search
MSELTKTLLNIRSLRAFSRELTLEQLEEALDKLSTVVAERKEAEEAELAAQAEQEAKLAE
IAEKIAQDGIDVEALINALSGETKTKAKSKRAPRPAKYKYTDTNGQEKTWTGQGRTPSAI
QEQLDAGKSLDDFLI
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagctgactaaaacacttctaaatatccgtagccttcgtgcgttttctcgtgag
ctgactcttgaacaattggaagaagctctagataaactttctactgttgtagcagagcgt
aaagaagcggaagaagcggaactcgcagcacaagctgagcaagaagctaagcttgctgaa
atcgcagaaaaaattgctcaagacggtattgacgttgaagctcttattaatgcgctatca
ggcgaaactaagactaaagcaaaatctaagcgcgcacctcgccctgcaaaatacaagtac
acggatactaacggtcaagaaaaaacctggacaggccaaggtcgtacaccttctgcaatc
caagagcagcttgatgcaggtaaatcactagatgatttcctaatctaa
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