Vibrio sp. EJY3: VEJY3_10125
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Entry
VEJY3_10125 CDS
T01683
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vej
Vibrio sp. EJY3
Brite
KEGG Orthology (KO) [BR:
vej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vej03032
]
VEJY3_10125
03400 DNA repair and recombination proteins [BR:
vej03400
]
VEJY3_10125
Enzymes [BR:
vej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VEJY3_10125
DNA replication proteins [BR:
vej03032
]
Prokaryotic type
DNA Topoisomerases
VEJY3_10125
DNA repair and recombination proteins [BR:
vej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VEJY3_10125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
DUF6674
TPD52
Motif
Other DBs
NCBI-ProteinID:
AEX22505
LinkDB
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Position
1:complement(2238377..2241010)
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AA seq
877 aa
AA seq
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MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT
NIPPHNLGEVIDGCLAYINNEAITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI
YMRSKADIETEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDGM
RIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRREV
VTRRTIFELRKARERAHILEGLALALANIDEIIDLIRKAPTPAEAKAGLIARGWDLGNVA
AMLERAGTDAARPEWLEPQYGIRDGQYFLTEQQAQAILDLRLHKLTGLEHEKILAEYKEL
LDEIAELMHILASTERLMEVIREELEAVRDGFADERRTEITAASHDIDMEELIAREDVVV
TLSHGGYVKYQVLSDYESQRRGGKGKSATKMKDEDHIERLLVANTHDNILCFSTRGKTYR
LKVYQLPLASRTARGKPIVNILPLEDGERITAILRVDEFSEDKFIFMATGDGTVKKTPLN
QFANVRSNGLIAVNLRDDDSLIGVDITNGDSDIMLFSKAGKVVRFSEDKVRAMGRTAAGV
RGMKLGEDDQVVSLIVPSNEGDILTVTENGYGKRTELAEYPTKGRATQGVVSIKVSERNG
PVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRTAEDETVVGLQRIDE
IEDADLPEGEEGESTEPSAEQQAPEAPESPAAEDSED
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttagctaaagagatcacgcccgtaaacattgaagacgagcttagaggttca
tatctagactacgcgatgtcagtaatcgtgggtcgtgctcttccagatgtgcgtgatggt
ctaaaaccagtgcaccgtcgcgttttattcgcgatgaacgtactaggcaacgattggaac
aaaccatataaaaaatcagcccgtgttgtcggcgacgtaatcggtaaatatcaccctcac
ggtgatagtgctgtgtacgacacaatcgtacgtatggctcagccgttctcacttcgttat
atgctggtcgatggccaaggtaactttggctcaatcgatggcgattctgctgcggcaatg
cgttataccgaagtacgtatggcaaaaattgcccacgagcttctggctgacctagataaa
gaaaccgtagactacgtacctaactacgatggtactgaacagattccagcggttcttcca
acaaaaattccaaacctattggtaaacggtgcctctggtatcgcagtaggtatggcgacc
aacatcccgccacataaccttggcgaagtgatcgatggctgccttgcatacatcaataat
gaagccatcactattgatgaactaatggattacatccctggtccagatttcccgacggca
gcacttatcagtggtcgtaaaggcattgtagacgcgtacaaaacaggtcgcggtaagatc
tacatgcgttcaaaagcggacatcgaaacagagaaaaacggtaaagaaaccatcatcgtt
accgaaattccttaccaagtgaacaaagctcgtttgatcgagaagattgctgaactggtt
aaagataagaaagtagaaggcatcagtgcgctacgtgacgaatctgacaaagatggtatg
cgtatcgttattgaatgtaagcgtgatgcagtaggcgaagtggttctgaacaacctttac
gctcaaactcagctgcaaacgactttcggtatcaacatggtagcgctgaacaacggtcag
ccacagctattcaacctgaaagacatgttgaagtgcttcgtggatcaccgtcgtgaagtg
gtaactcgccgtactattttcgaattgcgtaaagctcgtgaacgtgcccacatcctagaa
ggtttggcacttgcactagcaaatatcgatgaaatcatcgacctaattcgtaaagcacca
acgccagcagaagcaaaagcaggccttatcgcccgtggttgggatcttggcaacgtagca
gcgatgctagagcgtgctggtactgatgctgcgcgtcctgagtggctagagcctcaatat
ggtatccgtgacggtcagtacttcctgactgagcaacaagcgcaagcaatcctagatcta
cgtctacacaaattgactggtctggaacacgagaagattctggcggaatacaaagagctt
ctagatgaaatcgctgagctaatgcacattcttgcaagcactgagcgtttgatggaagtg
attcgtgaagagctagaagccgttcgtgacggttttgctgatgaacgtcgcactgaaatt
actgcagcgagccatgacattgacatggaagagctgattgctcgtgaagacgtagtagtc
actctgtctcacggcggttacgttaagtaccaagtactgagcgactacgagtcacagcgc
cgtggtggtaaaggtaagagcgcaactaagatgaaagacgaagaccatattgagcgtctt
ctagtggcgaatacccacgacaacatcctgtgtttctctacgcgtggtaaaacttaccgc
ttgaaagtttatcaattaccgctagcgagccgcactgctcgtggtaagcctatcgttaac
attcttcctctggaagatggagagcgtatcacggctatcctgcgtgtagatgagttctct
gaagataagttcatcttcatggcgacaggtgacggtacagttaagaagacgccactgaac
caatttgccaacgttcgttcaaacggccttatcgccgttaacctgcgtgatgatgattca
ctgatcggtgttgatatcaccaatggtgacagcgacatcatgctgttctctaaagcaggt
aaagttgttcgcttcagcgaagataaagtacgtgctatgggtcgtactgctgctggtgtt
cgcggtatgaagttgggtgaagatgaccaagttgtgtctctaattgttccttcaaacgaa
ggtgacatcctgactgtgaccgaaaatggctatggtaaacgtaccgagcttgccgagtac
ccaactaagggtcgtgcaacgcaaggtgtagtatctatcaaagtttctgaacgtaacgga
cctgtggttggtgcggtacaagtagaagaaggcgacgagatgatgatgatcaccgacgct
ggtactctagttcgtactcgtgtagcagaagttagtcaggttggtcgtaacactcaaggt
gtcacactgatcagaaccgctgaagatgaaacagtagtaggcctgcaacgcattgacgaa
attgaagacgctgatttaccagaaggtgaagaaggcgagtcaacggaaccaagtgcagag
caacaagctcctgaagctcctgagtctcctgctgcggaagatagcgaagattaa
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