Vibrio sp. EJY3: VEJY3_11280
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Entry
VEJY3_11280 CDS
T01683
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
vej
Vibrio sp. EJY3
Brite
KEGG Orthology (KO) [BR:
vej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vej03016
]
VEJY3_11280 (truA)
Enzymes [BR:
vej01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
VEJY3_11280 (truA)
Transfer RNA biogenesis [BR:
vej03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VEJY3_11280 (truA)
Prokaryotic type
VEJY3_11280 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AEX22734
LinkDB
All DBs
Position
1:complement(2508917..2509711)
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AA seq
264 aa
AA seq
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MRIALGIEYNGTNYFGWQRQRDVKSVQEELEKALSIVANHPVEVQCAGRTDAGVHGTGQV
VHFDTNVDRKMVAWTMGANANMPGDIAVRWAKEVSDDFHARFSATARRYRYIIFNHALRP
GILSSGVSHYHGDLDEKKMHQAGQYLLGENDFSSFRAAHCQSLSPCRNMMHLNVTRHGDY
VVIDIKANAFVHHMVRNITGSLIKVGRGEENPEWIKWLLEAKDRKLAGATAKAEGLYLVD
VDYPQEFDLPRVPIGPLFLPDNLN
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcgcattaggtatcgagtataacggtacaaactactttggttggcaacgccag
agagacgtaaaaagcgtccaagaagagctggaaaaagcattgtctatcgttgcaaaccac
cctgtagaagtgcaatgtgcaggtcgtactgatgctggtgtacacggcaccggacaagtt
gttcactttgataccaacgtagatcgaaaaatggtggcttggacgatgggcgcaaatgcg
aacatgccaggtgatatcgctgttcgctgggcaaaggaagtatcagacgatttccatgct
cgattctcagcaacagcgcgccgttaccgctacatcattttcaatcacgctttacgtccg
gggatcttaagttcgggtgtcagtcactatcatggtgatctggatgagaaaaaaatgcat
caagcaggtcagtatttgttgggagaaaatgacttttcatcatttcgagcagctcactgt
cagtctctgagtccatgtcgcaacatgatgcacctgaacgtgactcgtcatggtgattat
gttgtcattgatattaaagcgaacgcctttgttcatcatatggtgcgcaatattacaggc
agcctgataaaagttggacgtggcgaagaaaatcctgaatggattaagtggctgttagag
gcaaaagaccgcaaacttgccggagcgacagcaaaagcagaaggcctatatttggtcgat
gtagattatccgcaagagtttgatttaccacgcgtaccgatcggcccgttatttttacca
gataatttgaactaa
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