Vibrio sp. EJY3: VEJY3_12680
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Entry
VEJY3_12680 CDS
T01683
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vej
Vibrio sp. EJY3
Brite
KEGG Orthology (KO) [BR:
vej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vej03016
]
VEJY3_12680 (truB)
Enzymes [BR:
vej01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VEJY3_12680 (truB)
Transfer RNA biogenesis [BR:
vej03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VEJY3_12680 (truB)
Prokaryotic type
VEJY3_12680 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AEX23012
LinkDB
All DBs
Position
1:complement(2819254..2820198)
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AA seq
314 aa
AA seq
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MARRRKGRPINGVILLDKPTGISSNDALQKVKRIYFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTNTSDSDGEVVETRPVDVDLEKLEACIDKFRGESDQ
VPSMFSALKYQGKPLYEYARKGIEVPRESRKITVYEIILHRFEGDEVEMEVHCSKGTYIR
TIVDDLGEMLGCGAHVTMLRRTGVAKYPYEKMVTLEQLNELLEQAHRQEVAPRELLDPLL
MPMDTAVEDLPEVNLIPELADMVQHGQPVQVSGAPTEGSLRLTMGEERLFIGVGEMNNDG
KIAPKRLVVFRDEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtcgtaaaggtcgtccaatcaatggcgttatcctgttagataaaccgaca
ggtatctcatctaatgatgcgttgcaaaaagtgaagcgcatttactttgctgaaaaagcg
ggtcatacgggtgcattggatcctctagcgacgggcatgttgccgatctgtttgggagag
gcaacaaagttttctcagttcctattggattcagacaaacgctaccgagtgatcgcgaaa
ctgggtgaacgtaccaacacatcagattctgatggtgaagtcgtagaaactcgtccggtc
gatgtggatcttgagaagctagaagcgtgcattgacaaattccgtggtgaatcggatcaa
gtaccttcaatgttttcagcgttgaaataccaaggtaagccgttgtacgagtatgcgcgt
aaaggaatcgaagttccgcgcgaatctcgtaaaatcacggtctacgaaatcatccttcat
cgttttgaaggtgatgaagtcgagatggaagtacactgttcaaaaggtacatacattcga
accatcgtcgatgaccttggtgaaatgttaggctgtggcgctcatgtcactatgcttcgc
cgtactggtgttgctaagtacccatatgagaagatggttacgcttgagcaacttaacgag
ttactggagcaagcacaccgccaagaggtcgcgccacgtgagcttttggatccgctgctt
atgccaatggacacagcggtagaagatctaccagaagtgaacctgataccagagcttgcg
gacatggttcaacatggtcaaccggttcaagtaagtggtgctcctaccgaaggttctctt
cgccttaccatgggagaagagcgcttattcatcggtgttggcgagatgaacaacgacgga
aaaatcgcaccaaaacgtttggtggtttttcgtgacgaagagtaa
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integrated database retrieval system
